RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 CTAG2O75638 210 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 GRPP07492 148 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 PRKACBP22694 351 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 PTGFRP43088 359 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 HAAOP46952 286 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 NPBWR2P48146 333 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 POU3F4P49335 361 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 RBP2P50120 134 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF81P51508 661 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 QRFPP83859 136 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF154Q13106 437 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 NKPD1Q17RQ9 610 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 FAM76BQ5HYJ3 339 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 GLIPR1L1Q6UWM5 242 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 RTN4RL2Q86UN3 420 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 MUC15Q8N387 334 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 MFSD4AQ8N468 514 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 TMEM104Q8NE00 496 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 OR13G1Q8NGZ3 307 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 OR8S1Q8NH09 359 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 LGALS14Q8TCE9 139 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 ACOT12Q8WYK0 555 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 SPSB1Q96BD6 273 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 PSMG3-AS1Q96PY0 264 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 GPER1Q99527 375 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 ABCB9Q9NP78 766 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 DCAF16Q9NXF7 216 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 TREM2Q9NZC2 230 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF581Q9P0T4 197 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 STEAP1Q9UHE8 339 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 ING4Q9UNL4 249 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 SLC7A11Q9UPY5 501 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 CSMD2Q7Z408 3487 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 TMEM272A0A1B0GTI8 110 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 J3QRK9 145 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 HS3ST1O14792 307 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 LDLRAD4O15165 306 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 EIF4EP06730 217 aaKnown RBP9.29□□□□□ -0.92
SCN9A-205ENST00000454569 SFTPBP07988 381 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 OCMP0CE72 109 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-205ENST00000454569 VSIG8P0DPA2 414 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 CFPP27918 469 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ATP1B3P54709 279 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF45Q02386 682 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 PDZK1IP1Q13113 114 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 UNC119Q13432 240 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 EFNB3Q15768 340 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 RAB11BQ15907 218 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 C11orf71Q6IPW1 123 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 C16orf87Q6PH81 154 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 HAGHLQ6PII5 290 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-205ENST00000454569 LHFPL2Q6ZUX7 228 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 SLC25A26Q70HW3 274 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 NKAIN3Q8N8D7 197 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 SCCPDHQ8NBX0 429 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 TNFAIP8L1Q8WVP5 186 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ITLN1Q8WWA0 313 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 SLAMF9Q96A28 289 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 FAM3DQ96BQ1 224 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 SLC25A38Q96DW6 304 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 SEH1LQ96EE3 360 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ELMOD3Q96FG2 381 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 WDFY2Q96P53 400 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 LIME1Q9H400 295 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 UBTD1Q9HAC8 227 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 UFSP2Q9NUQ7 469 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 MTCH1Q9NZJ7 389 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ADAM30Q9UKF2 790 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 MRPS28Q9Y2Q9 187 aaKnown RBP9.29□□□□□ -0.92
SCN9A-205ENST00000454569 PLSCR5A0PG75 271 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 C17orf100A8MU93 164 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 CDIPTO14735 213 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 MAGEB3O15480 346 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ERCC1P07992 297 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-205ENST00000454569 TMEM225BP0DP42 221 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 TNFSF8P32971 234 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ETV6P41212 452 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 EVX1P49640 407 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 GNG3P63215 75 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 CCL8P80075 99 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 AWAT2Q6E213 333 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ASCL4Q6XD76 172 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 CCDC190Q86UF4 302 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 FTMTQ8N4E7 242 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF611Q8N823 705 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 OR6M1Q8NGM8 313 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 AQP3Q92482 292 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 NRGNQ92686 78 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 FBXW5Q969U6 566 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 FAM46BQ96A09 425 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 SORCS2Q96PQ0 1159 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 HIST1H2AAQ96QV6 131 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 OR2V2Q96R30 315 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 GAL3ST1Q99999 423 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 MICU1Q9BPX6 476 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 UQCC2Q9BRT2 126 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 RTL8AQ9BWD3 113 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 CXXC4Q9H2H0 198 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 BANF2Q9H503 90 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms