RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CXCR4P61073 352 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 CXCL6P80162 114 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 MLLT11Q13015 90 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 NAB1Q13506 487 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 KIR2DS1Q14954 304 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 GUSBP1Q15486 140 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 TMEM176BQ3YBM2 270 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 HIGD2BQ4VC39 106 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 TCTEX1D4Q5JR98 221 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 PAGE3Q5JUK9 113 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 CCNJQ5T5M9 372 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 SYPL2Q5VXT5 272 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 HBMQ6B0K9 141 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 CGB2Q6NT52 195 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 C2orf66Q6UXQ4 117 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 PRSS41Q7RTY9 318 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 GTSCR1Q86UQ5 136 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 RALGPS2Q86X27 583 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 CBLN2Q8IUK8 224 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF485Q8NCK3 441 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 CCDC54Q8NEL0 328 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR10G3Q8NGC4 313 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR5B17Q8NGF7 314 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 PIGXQ8TBF5 258 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 TMEM234Q8WY98 164 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR5P2Q8WZ92 322 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 ARPC1AQ92747 370 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 HGDQ93099 445 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 TMEM230Q96A57 120 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 SMIM19Q96E16 107 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 RNF145Q96MT1 663 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 PDCD1LG2Q9BQ51 273 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 C20orf85Q9H1P6 137 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 PRO3102Q9H379 93 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 MFSD1Q9H3U5 465 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 ZNF442Q9H7R0 627 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 RDH14Q9HBH5 336 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 TMEM9BQ9NQ34 198 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 OR1A1Q9P1Q5 309 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 DPM3Q9P2X0 92 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 GUCA1BQ9UMX6 200 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 SLC7A11Q9UPY5 501 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 KLF12Q9Y4X4 402 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 CACNA1GO43497 2377 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 USP34Q70CQ2 3546 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 NCOR1O75376 2440 aa2.84□□□□□ -1.95
HMGB1P15-201ENST00000453854 LRRC37A2A6NM11 1700 aa2.84□□□□□ -1.96
HMGB1P15-201ENST00000453854 KTN1Q86UP2 1357 aaKnown RBP2.84□□□□□ -1.96
HMGB1P15-201ENST00000453854 MAST2Q6P0Q8 1798 aa2.84□□□□□ -1.96
HMGB1P15-201ENST00000453854 LTBP2Q14767 1821 aa2.84□□□□□ -1.96
HMGB1P15-201ENST00000453854 ECM29Q5VYK3 1845 aa2.84□□□□□ -1.96
HMGB1P15-201ENST00000453854 CACNA1BQ00975 2339 aa2.84□□□□□ -1.96
HMGB1P15-201ENST00000453854 PHF3Q92576 2039 aaKnown RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 REV3LO60673 3130 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 KIR2DL5BA0A0G2JN68 375 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 KIR2DL5BA0A0G2JPC4 375 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR2AT4A6NND4 320 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 ZNF726A6NNF4 738 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 TNFRSF11BO00300 401 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 UBDO15205 165 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 FABP7O15540 132 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 BCL2L11O43521 198 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 ENSAO43768 121 aaKnown RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 SHOX2O60902 331 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 CRLF1O75462 422 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 SRP72O76094 671 aaKnown RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 DUSP14O95147 198 aaKnown RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 RAB3DO95716 219 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 TTC4O95801 387 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 RLN2P04090 185 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 ISG15P05161 165 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 CALB1P05937 261 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 RPS17P08708 135 aaKnown RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 RBMY1CP0DJD4 496 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 SLC2A1P11166 492 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 ATF6P18850 670 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 PVALBP20472 110 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 F2RP25116 425 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 IL2RGP31785 369 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 PFN2P35080 140 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 SERPINB5P36952 375 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 RPS9P46781 194 aaKnown RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 IDH3GP51553 393 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 DLX1P56177 255 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 TAS2R31P59538 309 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 RAB8AP61006 207 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 SMARCB1Q12824 385 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 CDC20Q12834 499 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 TRAM1Q15629 374 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 TRIP13Q15645 432 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 SLC1A5Q15758 541 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 GUK1Q16774 197 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 Q1RN00 199 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 TIMM50Q3ZCQ8 353 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 ZNF658BQ4V348 819 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 ACSM3Q53FZ2 586 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR10J3Q5JRS4 329 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 MED27Q6P2C8 311 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 CD200R1LQ6Q8B3 271 aa2.83□□□□□ -1.96
HMGB1P15-201ENST00000453854 TMEM179Q6ZVK1 233 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms