RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MDFIC2A0A1B0GVS7 189 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 LOC107986453A0A1B0GWG9 222 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 DAPL1A0PJW8 107 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 ANKRD61A6NGH8 418 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 NKX6-3A6NJ46 265 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 H3BSH0 61 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 MPZL2O60487 215 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 UBCP0CG48 685 aaKnown RBP12□□□□□ -0.49
HSPG2-207ENST00000453796 NANOS3P60323 173 aaKnown RBP12□□□□□ -0.49
HSPG2-207ENST00000453796 PDCD1Q15116 288 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 ZSCAN26Q16670 478 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 METTL11BQ5VVY1 283 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 RBMS3Q6XE24 437 aaKnown RBP12□□□□□ -0.49
HSPG2-207ENST00000453796 CALHM1Q8IU99 346 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 RDH10Q8IZV5 341 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 APH1BQ8WW43 257 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 C10orf35Q96D05 121 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 PELI1Q96FA3 418 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 SDSLQ96GA7 329 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 ZNF488Q96MN9 340 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 DUX5Q96PT3 197 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 NRIP2Q9BQI9 281 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 CHST5Q9GZS9 411 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 ZMAT3Q9HA38 289 aaKnown RBP12□□□□□ -0.49
HSPG2-207ENST00000453796 HES4Q9HCC6 221 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 MRPS18AQ9NVS2 196 aaKnown RBP12□□□□□ -0.49
HSPG2-207ENST00000453796 FRRS1LQ9P0K9 344 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 SLC25A10Q9UBX3 287 aaPredicted RBP12□□□□□ -0.49
HSPG2-207ENST00000453796 PCDHGB1Q9Y5G3 927 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 TENM1Q9UKZ4 2725 aa12□□□□□ -0.49
HSPG2-207ENST00000453796 IGKV1-27A0A075B6S5 117 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 SNTNA6NMZ2 147 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 CLDN34H7C241 214 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 BAG2O95816 211 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 IGHA1P01876 353 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 ISG15P05161 165 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 CCR9P51686 369 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 ERVK11-1P61568 191 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 ACTG1P63261 375 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 IL24Q13007 206 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 BAMBIQ13145 260 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 GALEQ14376 348 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 DEFB112Q30KQ8 113 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 TMEM244Q5VVB8 128 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 RUSC1-AS1Q66K80 236 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 KIR3DL3Q8N743 410 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 Q8N7P7 452 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 ZNRF1Q8ND25 227 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 RDH12Q96NR8 316 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 PKIBQ9C010 78 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 PLEKHA1Q9HB21 404 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 MYRFQ9Y2G1 1151 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 POLDIP2Q9Y2S7 368 aa11.99□□□□□ -0.49
HSPG2-207ENST00000453796 IGHV1-69DA0A0B4J2H0 117 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 RFPL4AA6NLU0 287 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 RFPL4AL1F8VTS6 287 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 IGHV1-69P01742 117 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
HSPG2-207ENST00000453796 GABRA2P47869 451 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 SLC9A3R2Q15599 337 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 METAP1DQ6UB28 335 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-207ENST00000453796 VMO1Q7Z5L0 202 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 LHFPL3Q86UP9 236 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 ANGPTL5Q86XS5 388 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 EGFL6Q8IUX8 553 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 CD177Q8N6Q3 437 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 TRMT10AQ8TBZ6 339 aaKnown RBP11.98□□□□□ -0.49
HSPG2-207ENST00000453796 PP6455Q8WZ26 134 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 H1FXQ92522 213 aaKnown RBP11.98□□□□□ -0.49
HSPG2-207ENST00000453796 STMN2Q93045 179 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 LHX4Q969G2 390 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 ADAT3Q96EY9 351 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-207ENST00000453796 C4orf36Q96KX1 117 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 Q96MT0 163 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 ADI1Q9BV57 179 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 AMBNQ9NP70 447 aa11.98□□□□□ -0.49
HSPG2-207ENST00000453796 SMPD3Q9NY59 655 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-207ENST00000453796 IGKV1-9A0A0C4DH69 117 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 FAM230AA0A1W2PPH8 454 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 OR4C45A6NMZ5 311 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 J3QLW9 94 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 WBP4O75554 376 aaKnown RBP11.97□□□□□ -0.49
HSPG2-207ENST00000453796 GATBO75879 557 aaKnown RBP11.97□□□□□ -0.49
HSPG2-207ENST00000453796 HTR1AP08908 422 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 HKR1P10072 659 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 ZNF19P17023 458 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 FUT6P51993 359 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 ACTA2P62736 377 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 ACTG2P63267 376 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 RAB40BQ12829 278 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 ALKBH1Q13686 389 aaKnown RBP11.97□□□□□ -0.49
HSPG2-207ENST00000453796 SMIM21Q3B7S5 101 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 LPCAT4Q643R3 524 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 C12orf54Q6X4T0 127 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 Q6YL49 198 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 SYS1Q8N2H4 156 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 OR52I1Q8NGK6 324 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 OR10AC1Q8NH08 325 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 NPRL2Q8WTW4 380 aa11.97□□□□□ -0.49
HSPG2-207ENST00000453796 GATAD2BQ8WXI9 593 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms