RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CASQ1P31415 396 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 GSSP48637 474 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 CDK9P50750 372 aaKnown RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 XKP51811 444 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 DIO3P55073 304 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 GPX6P59796 221 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 IRX1P78414 480 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 MRPS25P82663 173 aaKnown RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 CKAP4Q07065 602 aaKnown RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 PLCXD2Q0VAA5 305 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 KRTAP21-3Q3LHN1 58 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 FBXL19-AS1Q494R0 122 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 SLC22A6Q4U2R8 563 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 OR2G6Q5TZ20 316 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 DGAT2L6Q6ZPD8 337 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 MYPOPQ86VE0 399 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 CDC20BQ86Y33 519 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 TGIF2LYQ8IUE0 185 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 PRR22Q8IZ63 422 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 RNF175Q8N4F7 328 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 COMMD1Q8N668 190 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 TPRX1Q8N7U7 411 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ACMSDQ8TDX5 336 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 DOK4Q8TEW6 326 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 KCTD4Q8WVF5 259 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 NRGNQ92686 78 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 UFD1Q92890 307 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 UCN3Q969E3 161 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 SLC38A4Q969I6 547 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ZFP3Q96NJ6 502 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ATOH8Q96SQ7 321 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 MCHR1Q99705 422 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 FAIM2Q9BWQ8 316 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 OSBPL11Q9BXB4 747 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ANGPTL4Q9BY76 406 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ELOVL6Q9H5J4 265 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ZNF385DQ9H6B1 395 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 AUNIPQ9H7T9 357 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 CXorf21Q9HAI6 301 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 SH2D2AQ9NP31 389 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 MIEF1Q9NQG6 463 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 TUBG2Q9NRH3 451 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 TBC1D24Q9ULP9 559 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 COPS3Q9UNS2 423 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 C15orf41Q9Y2V0 281 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 RNF11Q9Y3C5 154 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 ASB4Q9Y574 426 aa3.33□□□□□ -1.88
LINC00393-202ENST00000452852 CHCHD2Q9Y6H1 151 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-202ENST00000452852 MED12LQ86YW9 2145 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 IGHV3OR16-10A0A075B7F0 116 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 A0A1B0GWB2 263 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 GNG14A0A1W2PPG7 69 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 B4DXG7 233 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 RBMY1CP0DJD4 496 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 CPMP14384 443 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 NPR2P20594 1047 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 IGHV1-2P23083 117 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 DDOSTP39656 456 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 PTGDSP41222 190 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 SERPINB9P50453 376 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 ZNF136P52737 540 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 BIDP55957 195 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 PSPHP78330 225 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 MRPS22P82650 360 aaKnown RBP3.32□□□□□ -1.88
LINC00393-202ENST00000452852 PAX2Q02962 417 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 NNATQ16517 81 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 DEFB113Q30KQ7 82 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 VPS26BQ4G0F5 336 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 HIKESHIQ53FT3 197 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 TIGD3Q6B0B8 471 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 C8orf74Q6P047 294 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 ZNF343Q6P1L6 599 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 PAMR1Q6UXH9 720 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 LRRC74BQ6ZQY2 392 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 HIPK1Q86Z02 1210 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 SVOPLQ8N434 492 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 ZNF615Q8N8J6 731 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 CSNK1G2-AS1Q8NCQ2 148 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 MAPK1IP1LQ8NDC0 245 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 OR7G2Q8NG99 324 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 OR4C5Q8NGB2 326 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 PLPPR1Q8TBJ4 325 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 ZPLD1Q8TCW7 415 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 TSEN15Q8WW01 171 aaKnown RBP3.32□□□□□ -1.88
LINC00393-202ENST00000452852 ZBED6CLQ96FA7 236 aaPredicted RBP3.32□□□□□ -1.88
LINC00393-202ENST00000452852 LINC00479Q96M42 142 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 COL21A1Q96P44 957 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 SFXN3Q9BWM7 321 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 UGT2B28Q9BY64 529 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 NIPAL2Q9H841 368 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 PROK2Q9HC23 129 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 NUDT15Q9NV35 164 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 SENP1Q9P0U3 644 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 DKKL1Q9UK85 242 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 STK38LQ9Y2H1 464 aa3.32□□□□□ -1.88
LINC00393-202ENST00000452852 TEP1Q99973 2627 aaKnown RBP3.31□□□□□ -1.88
LINC00393-202ENST00000452852 MPDZO75970 2070 aa3.31□□□□□ -1.88
LINC00393-202ENST00000452852 HEATR5AQ86XA9 2040 aa3.31□□□□□ -1.88
LINC00393-202ENST00000452852 OR6C70A6NIJ9 312 aa3.31□□□□□ -1.88
LINC00393-202ENST00000452852 FAM25EA8MYX2 175 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms