RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 NRIP2Q9BQI9 281 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 DCTN5Q9BTE1 182 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 HES4Q9HCC6 221 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 DNAJB11Q9UBS4 358 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 GNG8Q9UK08 70 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 A0A1B0GVI7 797 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 ANKRD61A6NGH8 418 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 OR4C45A6NMZ5 311 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 CLDN34H7C241 214 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 J3QT63 122 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 NDUFB3O43676 98 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 TOX4O94842 621 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 ISG15P05161 165 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 PRTN3P24158 256 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 HAAOP46952 286 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 CAV3P56539 151 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 GALEQ14376 348 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 ACP7Q6ZNF0 438 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 C1orf122Q6ZSJ8 110 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 LHFPL3Q86UP9 236 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 ANGPTL5Q86XS5 388 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 CD177Q8N6Q3 437 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 Q8N7P7 452 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 ST8SIA4Q92187 359 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 TMIGD2Q96BF3 282 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 C10orf35Q96D05 121 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 Q96MT0 163 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 RDH12Q96NR8 316 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 PCGF1Q9BSM1 259 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 MS4A7Q9GZW8 240 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 KPTNQ9Y664 436 aa11.59□□□□□ -0.55
RTFDC1-204ENST00000449062 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 IGKV1-9A0A0C4DH69 117 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 LOC107986453A0A1B0GWG9 222 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 SNTNA6NMZ2 147 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 H3BSH0 61 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 IL13RA1P78552 427 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 RAB40BQ12829 278 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 IL24Q13007 206 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 IKZF1Q13422 519 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 ZSCAN26Q16670 478 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 LRRC10Q5BKY1 277 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 TMEM244Q5VVB8 128 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 LPCAT4Q643R3 524 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 BRD3OSQ6XYD6 125 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 SYS1Q8N2H4 156 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 ZNRF1Q8ND25 227 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 OR10AC1Q8NH08 325 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 TNFRSF14Q92956 283 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 ADAT3Q96EY9 351 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 PKIBQ9C010 78 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 CHST5Q9GZS9 411 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 ISG20L2Q9H9L3 353 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 ERVK13-1Q9NX77 482 aa11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 SMPD3Q9NY59 655 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-204ENST00000449062 DNAJC9-AS1A6NH13 148 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 RFPL4AA6NLU0 287 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 E9PI62 339 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 RFPL4AL1F8VTS6 287 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 F8VVB4 439 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 F8VWA3 439 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 J3QLW9 94 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 FADS2O95864 444 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 UBCP0CG48 685 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 LIMS3P0CW19 117 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 LIMS4P0CW20 117 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 ZNF19P17023 458 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 PRDX2P32119 198 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 FUT6P51993 359 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 ADARB1P78563 741 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 PDCD1Q15116 288 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 SLC9A3R2Q15599 337 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 SMN1Q16637 294 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 DEFB112Q30KQ8 113 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 GPR157Q5UAW9 335 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 RBMS3Q6XE24 437 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 UTS2BQ765I0 119 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 OR52I1Q8NGK6 324 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 C4orf36Q96KX1 117 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 JAM3Q9BX67 310 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 UNKLQ9H9P5 680 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 FGF20Q9NP95 211 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 MTCH1Q9NZJ7 389 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 SLC25A10Q9UBX3 287 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 PKD1L1Q8TDX9 2849 aa11.57□□□□□ -0.56
RTFDC1-204ENST00000449062 IGHV1-69DA0A0B4J2H0 117 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 MDFIC2A0A1B0GVS7 189 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 IGHV1-69P01742 117 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 RNASE1P07998 156 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 BAMBIQ13145 260 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 ALKBH1Q13686 389 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 METTL11BQ5VVY1 283 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 RUSC1-AS1Q66K80 236 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 CRIP3Q6Q6R5 217 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 METAP1DQ6UB28 335 aaPredicted RBP11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 FAM220AQ7Z4H9 259 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 C11orf42Q8N5U0 333 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 KIR3DL3Q8N743 410 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 PACRGLQ8N7B6 248 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms