RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 F5H5K5 113 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 UCP2P55851 309 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 H3F3AP84243 136 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 HABP2Q14520 560 aaPredicted RBP16.69■□□□□ 0.26
SDCBP-204ENST00000447182 TMEM54Q969K7 222 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 SPACA9Q96E40 222 aaPredicted RBP16.69■□□□□ 0.26
SDCBP-204ENST00000447182 PIGQQ9BRB3 760 aa16.69■□□□□ 0.26
SDCBP-204ENST00000447182 ID4P47928 161 aa16.68■□□□□ 0.26
SDCBP-204ENST00000447182 CSNK1A1P48729 337 aa16.68■□□□□ 0.26
SDCBP-204ENST00000447182 RNF212Q495C1 297 aa16.68■□□□□ 0.26
SDCBP-204ENST00000447182 ZFP82Q8N141 532 aa16.68■□□□□ 0.26
SDCBP-204ENST00000447182 NABP1Q96AH0 204 aa16.68■□□□□ 0.26
SDCBP-204ENST00000447182 AKR1E2Q96JD6 320 aa16.68■□□□□ 0.26
SDCBP-204ENST00000447182 ELL3Q9HB65 397 aaPredicted RBP16.68■□□□□ 0.26
SDCBP-204ENST00000447182 ABCA7Q8IZY2 2146 aa16.68■□□□□ 0.26
SDCBP-204ENST00000447182 E5RGE8 158 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 TIAF1O95411 115 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 SEC11BP0C7V7 166 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 HGFACQ04756 655 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 GALNT14Q96FL9 552 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 HSF4Q9ULV5 492 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 NSG2Q9Y328 171 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 LSM5Q9Y4Y9 91 aaKnown RBP16.67■□□□□ 0.26
SDCBP-204ENST00000447182 MSTNO14793 375 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 ONECUT2O95948 504 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 OR5H8P0DN80 308 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 GABRR1P24046 479 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 PTAFRP25105 342 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 SNCAP37840 140 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 SECTM1Q8WVN6 248 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 PIGTQ969N2 578 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 RASL10BQ96S79 203 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 KCNIP3Q9Y2W7 256 aa16.67■□□□□ 0.26
SDCBP-204ENST00000447182 CEP290O15078 2479 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 OR5H15A6NDH6 313 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 PRSS44E7EML9 344 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 DANCRP0C864 163 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 DTYMKP23919 212 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 SUCLG1P53597 346 aaKnown RBP16.66■□□□□ 0.26
SDCBP-204ENST00000447182 PHYHD1Q5SRE7 291 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 PLXDC2Q6UX71 529 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 ZNF574Q6ZN55 896 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-204ENST00000447182 ERGIC1Q969X5 290 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 CLCC1Q96S66 551 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 HDHD3Q9BSH5 251 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-204ENST00000447182 SCRT1Q9BWW7 348 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 TUBA4BQ9H853 241 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 LAMA1P25391 3075 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 TRIOO75962 3097 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 M0R135 149 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 TSPAN15O95858 294 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 MBPP02686 304 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-204ENST00000447182 SRFP11831 508 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 PIGPP57054 158 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 TMEM187Q14656 261 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 LRTM2Q8N967 370 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 HIST1H2BAQ96A08 127 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 C14orf79Q96F83 325 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 ZNF799Q96GE5 643 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 SPSB2Q99619 263 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 SMIM3Q9BZL3 60 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 LIME1Q9H400 295 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 NECAP2Q9NVZ3 263 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 CEP192Q8TEP8 1941 aa16.66■□□□□ 0.26
SDCBP-204ENST00000447182 SCRG1O75711 98 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 EIF3GO75821 320 aaKnown RBP eCLIP16.65■□□□□ 0.26
SDCBP-204ENST00000447182 TMEM225BP0DP42 221 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 COL19A1Q14993 1142 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 ZNF385CQ66K41 422 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-204ENST00000447182 SPSB1Q96BD6 273 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 OR6C1Q96RD1 312 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 GINS3Q9BRX5 216 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 NAA60Q9H7X0 242 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 MTCH2Q9Y6C9 303 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 CHCHD2Q9Y6H1 151 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-204ENST00000447182 ARID1AO14497 2285 aa16.65■□□□□ 0.26
SDCBP-204ENST00000447182 ASCC3Q8N3C0 2202 aaKnown RBP16.64■□□□□ 0.26
SDCBP-204ENST00000447182 A0A087WZY1 265 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 C1orf196B1AJZ1 125 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 MT-ND4LP03901 98 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 PPT1P50897 306 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 GPR157Q5UAW9 335 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 CRB3Q9BUF7 120 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 METTL9Q9H1A3 318 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 C19orf25Q9UFG5 118 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-204ENST00000447182 BORCS7-ASMTA0A0B4J1R7 106 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 C5orf52A6NGY3 159 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 DHHO43323 396 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 VAMP5O95183 116 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 CD63P08962 238 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 ACAA1P09110 424 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-204ENST00000447182 PMELP40967 661 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 P2RY1P47900 373 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 MIDNQ504T8 468 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 LCN10Q6JVE6 187 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 ETV3LQ6ZN32 361 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 TMEM123Q8N131 208 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 LILRB1Q8NHL6 650 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-204ENST00000447182 SPTSSAQ969W0 71 aa16.64■□□□□ 0.25
SDCBP-204ENST00000447182 SUCNR1Q9BXA5 334 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms