RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 UBE2FQ969M7 185 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 CENPNQ96H22 339 aaPredicted RBP16.99■□□□□ 0.31
SDC1-205ENST00000447124 OSBPL10Q9BXB5 764 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 MOB1AQ9H8S9 216 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 BEX1Q9HBH7 125 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 OAZ3Q9UMX2 235 aa16.99■□□□□ 0.31
SDC1-205ENST00000447124 A0A1W2PQL4 384 aaPredicted RBP16.98■□□□□ 0.31
SDC1-205ENST00000447124 PQLC2LA1A4F0 135 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 DLGAP1O14490 977 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 NPFFO15130 113 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 NOS1APO75052 506 aaPredicted RBP16.98■□□□□ 0.31
SDC1-205ENST00000447124 PGA5P0DJD9 388 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 FCGR1AP12314 374 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 HTR1FP30939 366 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 HAAOP46952 286 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 KRTAP10-3P60369 221 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 TAF9Q16594 264 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 OLFML2AQ68BL7 652 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 NPRL2Q8WTW4 380 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 EME1Q96AY2 570 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 GABARAPL3Q9BY60 117 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 FAM96BQ9Y3D0 163 aa16.98■□□□□ 0.31
SDC1-205ENST00000447124 WNK1Q9H4A3 2382 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 A0A1B0GUS0 222 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 A0A1W2PQ09 198 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 CLPSL1A2RUU4 121 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 SAC3D1A6NKF1 404 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 J3QT63 122 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 M0R1W7 72 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 KNG1P01042 644 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 OR2T7P0C7T2 308 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 CCL1P22362 96 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 PRDX2P32119 198 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 GUCA2AQ02747 115 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 ODF4Q2M2E3 257 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 ASRGL1Q7L266 308 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 CATSPERDQ86XM0 798 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 ANGPTL5Q86XS5 388 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 ZNF573Q86YE8 665 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 BATF2Q8N1L9 274 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 YIPF7Q8N8F6 280 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 TMEM185AQ8NFB2 350 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 OR2T27Q8NH04 317 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 WFDC12Q8WWY7 111 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 RORBQ92753 470 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 RNF166Q96A37 237 aaPredicted RBP16.97■□□□□ 0.31
SDC1-205ENST00000447124 RIBC2Q9H4K1 309 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 C19orf12Q9NSK7 152 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 ZNRD1Q9P1U0 126 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 ENOPH1Q9UHY7 261 aa16.97■□□□□ 0.31
SDC1-205ENST00000447124 METTL15A6NJ78 407 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 H3BSH0 61 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 KRT8P05787 483 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 EEF1B2P24534 225 aaKnown RBP16.96■□□□□ 0.31
SDC1-205ENST00000447124 CEBPDP49716 269 aaPredicted RBP16.96■□□□□ 0.31
SDC1-205ENST00000447124 UBE2E1P51965 193 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 CALHM1Q8IU99 346 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 C11orf42Q8N5U0 333 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 OR8J1Q8NGP2 316 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 C17orf50Q8WW18 174 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 AJUBAQ96IF1 538 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 NRIP2Q9BQI9 281 aa16.96■□□□□ 0.31
SDC1-205ENST00000447124 METTL8Q9H825 291 aaKnown RBP16.96■□□□□ 0.31
SDC1-205ENST00000447124 WIPF1O43516 503 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 FBP1P09467 338 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 MPZP25189 248 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 RPL15P61313 204 aaKnown RBP16.95■□□□□ 0.3
SDC1-205ENST00000447124 ZNF85Q03923 595 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 UBE2V2Q15819 145 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 FAM185AQ8N0U4 392 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 OR10H4Q8NGA5 316 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 LINC01006Q8NI28 216 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 PYDC1Q8WXC3 89 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 DPAGT1Q9H3H5 408 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 HES4Q9HCC6 221 aa16.95■□□□□ 0.3
SDC1-205ENST00000447124 MEGF8Q7Z7M0 2845 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 TRBV23-1A0A0A0MS06 115 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 MEIOCA2RUB1 952 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 DHRS7CA6NNS2 312 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 SULT1C4O75897 302 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 SAA4P35542 130 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 CAPZA1P52907 286 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 ERVFRD-1P60508 538 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 ERVK11-1P61568 191 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 TMEM200BQ69YZ2 307 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 PRSS35Q8N3Z0 413 aa16.94■□□□□ 0.3
SDC1-205ENST00000447124 ZSCAN4Q8NAM6 433 aaPredicted RBP16.94■□□□□ 0.3
SDC1-205ENST00000447124 CAB39Q9Y376 341 aaPredicted RBP16.94■□□□□ 0.3
SDC1-205ENST00000447124 IGKV1-27A0A075B6S5 117 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 E9PQ18 207 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 F8VVB4 439 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 F8VWA3 439 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 CIB2O75838 187 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 ISL1P61371 349 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 SMIM21Q3B7S5 101 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 NCR3LG1Q68D85 454 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 TREML4Q6UXN2 200 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 Q6ZSV7 163 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 MKXQ8IYA7 352 aa16.93■□□□□ 0.3
SDC1-205ENST00000447124 RDH10Q8IZV5 341 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms