RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PNLIPRP3Q17RR3 467 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 MICBQ29980 383 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 C2orf68Q2NKX9 166 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 ATPAF1Q5TC12 328 aaPredicted RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 ZBTB37Q5TC79 503 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 ZNF585AQ6P3V2 769 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 C9orf62Q8N4C0 152 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 OR51F2Q8NH61 342 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 BCL2L2Q92843 193 aaPredicted RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 SPSB4Q96A44 273 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 POM121L2Q96KW2 1035 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 COQ3Q9NZJ6 369 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 ZNF629Q9UEG4 869 aaPredicted RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 ATPIF1Q9UII2 106 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 VSIG4Q9Y279 399 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 SPENQ96T58 3664 aaKnown RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 IGKV1-12A0A0C4DH73 117 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 SDCBPO00560 298 aaPredicted RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 SS18L1O75177 396 aaPredicted RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 SLC22A5O76082 557 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 IGKV1D-12P01611 117 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 COX5BP10606 129 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 PDZK1IP1Q13113 114 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 PRDX4Q13162 271 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 ZNF169Q14929 603 aaPredicted RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 TSC22D1Q15714 1073 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 PIGYQ3MUY2 71 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 SPICQ8N5J4 248 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 CSNK2A3Q8NEV1 391 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 OR8H1Q8NGG4 311 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 NANOS1Q8WY41 292 aaKnown RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 SARAFQ96BY9 339 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 TAAR6Q96RI8 345 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 OCSTAMPQ9BR26 566 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 FAAP24Q9BTP7 215 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 TM2D1Q9BX74 207 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 CRIM1Q9NZV1 1036 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 ZNF581Q9P0T4 197 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 LUZP4Q9P127 313 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 CLCF1Q9UBD9 225 aa8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 FBXO9Q9UK97 447 aaPredicted RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 CNOT1A5YKK6 2376 aaKnown RBP8.23□□□□□ -1.09
COL6A4P1-201ENST00000446690 URB1O60287 2271 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 OR2AT4A6NND4 320 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 AQP7O14520 342 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 GEMIN2O14893 280 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 SFTPBP07988 381 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 AKR1C4P17516 323 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 GPM6AP51674 278 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 SNU13P55769 128 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 UBE2NP61088 152 aaKnown RBP8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 SPATA46Q5T0L3 261 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 SEZ6L2Q6UXD5 910 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 SLC25A26Q70HW3 274 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 FAM214BQ7L5A3 538 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 CALHM1Q8IU99 346 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 FBXL14Q8N1E6 418 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 SLC30A7Q8NEW0 376 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 OR2AK2Q8NG84 335 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 OR5H2Q8NGV7 314 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 Q96M66 194 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 HDHD3Q9BSH5 251 aaPredicted RBP8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 C1QTNF6Q9BXI9 259 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 GP6Q9HCN6 339 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 FREM1Q5H8C1 2179 aa8.22□□□□□ -1.09
COL6A4P1-201ENST00000446690 FOXI3A8MTJ6 420 aaPredicted RBP8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 SERPINE3A8MV23 424 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 CEACAM4O75871 244 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 HLA-AP01891 365 aaKnown RBP8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 ZNF250P15622 560 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 IGHV1-2P23083 117 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 SSTR2P30874 369 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 WNT5AP41221 380 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 CBX5P45973 191 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 HAAOP46952 286 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 H2BFSP57053 126 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 TGFBR3Q03167 851 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 TMEM65Q6PI78 240 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 TFAP2EQ6VUC0 442 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 OSR2Q8N2R0 312 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 ZNF611Q8N823 705 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 C9orf106Q8NAJ2 232 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 ADAD2Q8NCV1 583 aaKnown RBP8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 MARCH1Q8TCQ1 289 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 MRGPRFQ96AM1 343 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 HIST1H2AAQ96QV6 131 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 ALX4Q9H161 411 aaPredicted RBP8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 GLRX2Q9NS18 164 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 SLC2A8Q9NY64 477 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 PIPOXQ9P0Z9 390 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 ST3GAL6Q9Y274 331 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 NPTNQ9Y639 398 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 PTPRBP23467 1997 aa8.21□□□□□ -1.09
COL6A4P1-201ENST00000446690 I3L521 148 aa8.21□□□□□ -1.1
COL6A4P1-201ENST00000446690 CELA3BP08861 270 aa8.21□□□□□ -1.1
COL6A4P1-201ENST00000446690 ZNF35P13682 527 aa8.21□□□□□ -1.1
COL6A4P1-201ENST00000446690 TBPP20226 339 aa8.21□□□□□ -1.1
COL6A4P1-201ENST00000446690 VAMP1P23763 118 aa8.21□□□□□ -1.1
COL6A4P1-201ENST00000446690 NPBWR2P48146 333 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms