RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ADAMTS9Q9P2N4 1935 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 GEMIN2O14893 280 aaKnown RBP12.26□□□□□ -0.45
VPS52-212ENST00000445902 AHSA1O95433 338 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 MT-ATP6P00846 226 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 G0S2P27469 103 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 PIGPP57054 158 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 SLC37A1P57057 533 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 SPCS3P61009 180 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 HIKESHIQ53FT3 197 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 PHLDA2Q53GA4 152 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 ZNF248Q8NDW4 579 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 OR2G3Q8NGZ4 309 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 RHBDD1Q8TEB9 315 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 URM1Q9BTM9 101 aaKnown RBP12.26□□□□□ -0.45
VPS52-212ENST00000445902 STRAPQ9Y3F4 350 aaKnown RBP12.26□□□□□ -0.45
VPS52-212ENST00000445902 MYO9BQ13459 2157 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 CCDC163A0A0D9SF12 145 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 K7N7A8 449 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 GPR137BO60478 399 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 TMEM176BQ3YBM2 270 aaPredicted RBP12.26□□□□□ -0.45
VPS52-212ENST00000445902 TANGO2Q6ICL3 276 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 NAXEQ8NCW5 288 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 SLC37A2Q8TED4 501 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 LIN37Q96GY3 246 aaPredicted RBP12.26□□□□□ -0.45
VPS52-212ENST00000445902 SHDQ96IW2 340 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 VN1R1Q9GZP7 353 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 LIME1Q9H400 295 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 MCTS1Q9ULC4 181 aaKnown RBP12.26□□□□□ -0.45
VPS52-212ENST00000445902 PADI1Q9ULC6 663 aa12.26□□□□□ -0.45
VPS52-212ENST00000445902 NCOA6Q14686 2063 aaPredicted RBP12.25□□□□□ -0.45
VPS52-212ENST00000445902 ZNF724A8MTY0 619 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 PGA4P0DJD7 388 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 PGA5P0DJD9 388 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 GABRR1P24046 479 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 CDAP32320 146 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 RRADP55042 308 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 OGFOD3Q6PK18 319 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 SUMF1Q8NBK3 374 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 PTPMT1Q8WUK0 201 aaPredicted RBP12.25□□□□□ -0.45
VPS52-212ENST00000445902 TSLPQ969D9 159 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 NUDT16L1Q9BRJ7 211 aaKnown RBP12.25□□□□□ -0.45
VPS52-212ENST00000445902 NXT1Q9UKK6 140 aaKnown RBP12.25□□□□□ -0.45
VPS52-212ENST00000445902 KCNIP3Q9Y2W7 256 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 LTBP2Q14767 1821 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 NSG1A0A0A6YYJ2 146 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 TLCD2A6NGC4 264 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 PTBP3O95758 552 aaKnown RBP12.25□□□□□ -0.45
VPS52-212ENST00000445902 OR5H8P0DN80 308 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 SLC6A8P48029 635 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 IGLV3-21P80748 117 aaPredicted RBP12.25□□□□□ -0.45
VPS52-212ENST00000445902 PRSS58Q8IYP2 241 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 OR5L1Q8NGL2 311 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 GPBAR1Q8TDU6 330 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 BMFQ96LC9 184 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 PECRQ9BY49 303 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 FBLN5Q9UBX5 448 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 AK3Q9UIJ7 227 aa12.25□□□□□ -0.45
VPS52-212ENST00000445902 A0A087WZY1 265 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 SMCO3A2RU48 225 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 C5orf63A6NC05 138 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 CRYM-AS1A6NIL9 109 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 MS4A18H0YCH9 400 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 OPN1LWP04000 364 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 SRP19P09132 144 aaKnown RBP12.24□□□□□ -0.45
VPS52-212ENST00000445902 TMEM225BP0DP42 221 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 PGCP20142 388 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 LMO1P25800 156 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 C1orf61Q13536 156 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 RUNX3Q13761 415 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 C21orf62-AS1Q17RA5 79 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 RSPO4Q2I0M5 234 aaPredicted RBP12.24□□□□□ -0.45
VPS52-212ENST00000445902 MS4A18Q3C1V0 323 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 FBXW12Q6X9E4 464 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 DPPA2Q7Z7J5 298 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 ARHGEF39Q8N4T4 335 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 OR8B12Q8NGG6 310 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 ASB10Q8WXI3 467 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 HIST1H2BLQ99880 126 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 SUSD2Q9UGT4 822 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 IGKV1-9A0A0C4DH69 117 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 CYTIPO60759 359 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 OPRM1P35372 400 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 APLNRP35414 380 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 POLR2HP52434 150 aaKnown RBP12.24□□□□□ -0.45
VPS52-212ENST00000445902 ARMC6Q6NXE6 501 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 C5orf34Q96MH7 638 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 SLC25A31Q9H0C2 315 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 BCO1Q9HAY6 547 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 TBX21Q9UL17 535 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 FAM24AA6NFZ4 105 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 SHISA8B8ZZ34 492 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 STMND1H3BQB6 276 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 RPL36A-HNRNPH2H7BZ11 118 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 SCAF4O95104 1147 aaKnown RBP12.24□□□□□ -0.45
VPS52-212ENST00000445902 ATP6V0CP27449 155 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 SUCLG1P53597 346 aaKnown RBP12.24□□□□□ -0.45
VPS52-212ENST00000445902 ZNF121P58317 390 aaPredicted RBP12.24□□□□□ -0.45
VPS52-212ENST00000445902 SPSB3Q6PJ21 355 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 DNM1P34Q6PK57 102 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 LRRC18Q8N456 261 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms