RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 COL6A5A8TX70 2615 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 IGHV1-69-2A0A0G2JMI3 117 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 SMIM30A4D0T7 59 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 CDIPTO14735 213 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 SSX4O60224 188 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 F12P00748 615 aaPredicted RBP14.53□□□□□ -0.08
LIME1-202ENST00000444951 DAOP14920 347 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 GALP22466 123 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 COL8A2P25067 703 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 HAAOP46952 286 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 GMFBP60983 142 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 ZNF154Q13106 437 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 CLEC12BQ2HXU8 276 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 ZNF529Q6P280 563 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 HAGHLQ6PII5 290 aaPredicted RBP14.53□□□□□ -0.08
LIME1-202ENST00000444951 LHFPL2Q6ZUX7 228 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 BATF2Q8N1L9 274 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 JAGN1Q8N5M9 183 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 SCCPDHQ8NBX0 429 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 PHYHIPQ92561 330 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 CCL17Q92583 94 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 FN3KRPQ9HA64 309 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 GCM1Q9NP62 436 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 SNTG1Q9NSN8 517 aa14.53□□□□□ -0.08
LIME1-202ENST00000444951 AK6Q9Y3D8 172 aaKnown RBP14.53□□□□□ -0.08
LIME1-202ENST00000444951 LRP5LA4QPB2 252 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 TMEM210A6NLX4 147 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 ADRA2CP18825 462 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 FGF9P31371 208 aaPredicted RBP14.52□□□□□ -0.09
LIME1-202ENST00000444951 KISS1Q15726 138 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 LRRTM1Q86UE6 522 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 ZNF573Q86YE8 665 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 CALHM1Q8IU99 346 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 CELF2-AS1Q8N7Q2 184 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 YIPF5Q969M3 257 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 KCTD7Q96MP8 289 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 FAM192AQ9GZU8 254 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 OR51I2Q9H344 312 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 DCAF16Q9NXF7 216 aa14.52□□□□□ -0.09
LIME1-202ENST00000444951 SHISA3A0PJX4 238 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 CCDC160A6NGH7 325 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 C3orf80F5H4A9 247 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 SPRY1O43609 319 aaPredicted RBP14.51□□□□□ -0.09
LIME1-202ENST00000444951 RHBDL1O75783 438 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 CYB5R3P00387 301 aaPredicted RBP14.51□□□□□ -0.09
LIME1-202ENST00000444951 ZNF93P35789 620 aaPredicted RBP14.51□□□□□ -0.09
LIME1-202ENST00000444951 PMELP40967 661 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 VBP1P61758 197 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 NCS1P62166 190 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 HOXA4Q00056 320 aaPredicted RBP14.51□□□□□ -0.09
LIME1-202ENST00000444951 MXD1Q05195 221 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 BLMHQ13867 455 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 HFEQ30201 348 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 SLC16A12Q6ZSM3 486 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 ANKRD13BQ86YJ7 626 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 OR11L1Q8NGX0 322 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 RDH5Q92781 318 aa14.51□□□□□ -0.09
LIME1-202ENST00000444951 METTL17Q9H7H0 456 aaPredicted RBP14.51□□□□□ -0.09
LIME1-202ENST00000444951 SYNGR1O43759 233 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 ANGPTL7O43827 346 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 ALX3O95076 343 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 TMEM225BP0DP42 221 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 IRF2P14316 349 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 SDC2P34741 201 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 GATA4P43694 442 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 GDPGP1Q6ZNW5 385 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 SLC25A26Q70HW3 274 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 C11orf53Q8IXP5 236 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 ZNF525Q8N782 197 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 LRRC29Q8WV35 223 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 TNFAIP8L1Q8WVP5 186 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 AQP3Q92482 292 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 SLAMF9Q96A28 289 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 ZNF488Q96MN9 340 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 REG4Q9BYZ8 158 aa14.5□□□□□ -0.09
LIME1-202ENST00000444951 ELL3Q9HB65 397 aaPredicted RBP14.5□□□□□ -0.09
LIME1-202ENST00000444951 BARX1Q9HBU1 254 aaPredicted RBP14.5□□□□□ -0.09
LIME1-202ENST00000444951 FBN3Q75N90 2809 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 TRAV1-2A0A0B4J238 106 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 MEGF11A6BM72 1044 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 J3QT63 122 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 PDCD5O14737 125 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 NOL3O60936 208 aaKnown RBP14.49□□□□□ -0.09
LIME1-202ENST00000444951 CDRT1O95170 752 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 ZNF205O95201 554 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 ALDOBP05062 364 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 CLEC2LP0C7M8 214 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 OR3A4PP47883 348 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 OR10A3P58181 314 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 FAM76BQ5HYJ3 339 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 GLT8D1Q68CQ7 371 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 WDR82Q6UXN9 313 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 DNM1P46Q6ZS02 220 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 NKAIN3Q8N8D7 197 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 PNLDC1Q8NA58 520 aaKnown RBP14.49□□□□□ -0.09
LIME1-202ENST00000444951 C19orf18Q8NEA5 215 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 CPNE2Q96FN4 548 aaPredicted RBP14.49□□□□□ -0.09
LIME1-202ENST00000444951 GFI1Q99684 422 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 TMEM106BQ9NUM4 274 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 RNF7Q9UBF6 113 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms