RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 LCATP04180 440 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 TPT1P13693 172 aaKnown RBP13.93□□□□□ -0.18
SHQ1-202ENST00000444040 PSG4Q00888 419 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 WIPI1Q5MNZ9 446 aaPredicted RBP13.93□□□□□ -0.18
SHQ1-202ENST00000444040 ACER2Q5QJU3 275 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 DCAF12Q5T6F0 453 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 TMEM42Q69YG0 159 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 PLXDC2Q6UX71 529 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 ASCL4Q6XD76 172 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 TIPARPQ7Z3E1 657 aaKnown RBP13.93□□□□□ -0.18
SHQ1-202ENST00000444040 BAP18Q8IXM2 172 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 OR1S2Q8NGQ3 325 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 OR2V1Q8NHB1 315 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 METTL8Q9H825 291 aaKnown RBP13.93□□□□□ -0.18
SHQ1-202ENST00000444040 PCDHB10Q9UN67 800 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 NCKAP5O14513 1909 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 FAM230AA0A1W2PPH8 454 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 TSPAN4O14817 238 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 APOC3P02656 99 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 RGS19P49795 217 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 ZNF273Q14593 569 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 FGFBP3Q8TAT2 258 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 FOXB1Q99853 325 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 PIGMQ9H3S5 423 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 TMEM100Q9NV29 134 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 HSF4Q9ULV5 492 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 SIGLEC5O15389 551 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 KNG1P01042 644 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 TCN2P20062 427 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 SIGLEC14Q08ET2 396 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 RAB32Q13637 225 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 CNN3Q15417 329 aaKnown RBP13.92□□□□□ -0.18
SHQ1-202ENST00000444040 TAF9Q16594 264 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 ESX1Q8N693 406 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 BPIFCQ8NFQ6 507 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 AQP10Q96PS8 301 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 ZNF2Q9BSG1 426 aaPredicted RBP13.92□□□□□ -0.18
SHQ1-202ENST00000444040 FAAP24Q9BTP7 215 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 WNT5BQ9H1J7 359 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 ANXA10Q9UJ72 324 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 PCSK5Q92824 1860 aa13.92□□□□□ -0.18
SHQ1-202ENST00000444040 TERTO14746 1132 aaKnown RBP13.91□□□□□ -0.18
SHQ1-202ENST00000444040 PRKACBP22694 351 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 ACP1P24666 158 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 ECI1P42126 302 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 RSU1Q15404 277 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 CEACAM16Q2WEN9 425 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 RIPPLY2Q5TAB7 128 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 OR51F2Q8NH61 342 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 MARC2Q969Z3 335 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 SMOC1Q9H4F8 434 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 EDARQ9UNE0 448 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 C14orf166Q9Y224 244 aaKnown RBP13.91□□□□□ -0.18
SHQ1-202ENST00000444040 MRPS18CQ9Y3D5 142 aaKnown RBP13.91□□□□□ -0.18
SHQ1-202ENST00000444040 TIMM10BQ9Y5J6 103 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 COL27A1Q8IZC6 1860 aaPredicted RBP13.91□□□□□ -0.18
SHQ1-202ENST00000444040 PINLYPA6NC86 204 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 CSTBP04080 98 aaKnown RBP13.91□□□□□ -0.18
SHQ1-202ENST00000444040 HTR5AP47898 357 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 RBP2P50120 134 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 SSPNQ14714 243 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 CT55Q8WUE5 264 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 GUCD1Q96NT3 240 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 OR2H1Q9GZK4 316 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 LIME1Q9H400 295 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 AK3Q9UIJ7 227 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 COLQQ9Y215 455 aaPredicted RBP13.91□□□□□ -0.18
SHQ1-202ENST00000444040 TRIM77I1YAP6 450 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 TRAPPC6AO75865 159 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 PLATP00750 562 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 HOXB5P09067 269 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 GFRA1P56159 465 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 STK11Q15831 433 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 PLEKHN1Q494U1 663 aaPredicted RBP13.91□□□□□ -0.18
SHQ1-202ENST00000444040 FAM219AQ8IW50 185 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 PSMF1Q92530 271 aa13.91□□□□□ -0.18
SHQ1-202ENST00000444040 CPNE2Q96FN4 548 aaPredicted RBP13.91□□□□□ -0.18
SHQ1-202ENST00000444040 IGKV1-12A0A0C4DH73 117 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 hCG_38984A0A1B0GV85 526 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 IFNA2P01563 188 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 IGKV1D-12P01611 117 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 CTSDP07339 412 aaPredicted RBP13.9□□□□□ -0.18
SHQ1-202ENST00000444040 CD79AP11912 226 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 FAM3AP98173 230 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 LHFPL2Q6ZUX7 228 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.9□□□□□ -0.18
SHQ1-202ENST00000444040 C1orf210Q8IVY1 113 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 ZNF100Q8IYN0 542 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 BORCS8Q96FH0 119 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 GPR35Q9HC97 309 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 ZNF391Q9UJN7 358 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 LOXL2Q9Y4K0 774 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 RAB19A4D1S5 217 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 NRASP01111 189 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 SERPINA7P05543 415 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 CHATP28329 748 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 RRADP55042 308 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 FOXO1Q12778 655 aa13.9□□□□□ -0.18
SHQ1-202ENST00000444040 RBM39Q14498 530 aaKnown RBP13.9□□□□□ -0.18
SHQ1-202ENST00000444040 UQCC3Q6UW78 93 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms