RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 HNRNPA1L2Q32P51 320 aaKnown RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 OR52E1Q8NGJ3 308 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 RTN4IP1Q8WWV3 396 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 SPACA5Q96QH8 159 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 PCGF1Q9BSM1 259 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 FBRSQ9HAH7 460 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 PDGFBP01127 241 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 HOXA6P31267 233 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 OR2J1Q9GZK6 312 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 PBOV1Q9GZY1 135 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 TRAV1-1A0A0B4J248 108 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 NKX2-6A6NCS4 301 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 MDKP21741 143 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 BCKDHBP21953 392 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 UCP2P55851 309 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 C1orf194Q5T5A4 169 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 FHL5Q5TD97 284 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 WWTR1Q9GZV5 400 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 MT-ATP6P00846 226 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 MMP9P14780 707 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CTLA4P16410 223 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CFPP27918 469 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 MAS1LP35410 378 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 METAP1P53582 386 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ICAM4Q14773 271 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ELOBQ15370 118 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ZNF260Q3ZCT1 412 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 C1QL3Q5VWW1 255 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 FAM160A2Q8N612 972 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 ARV1Q9H2C2 271 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 P4HTMQ9NXG6 502 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 SRP19P09132 144 aaKnown RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 VSIG8P0DPA2 414 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 SLC6A8P48029 635 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CCDC71LQ8N9Z2 235 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ERGIC1Q969X5 290 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 FOXD3Q9UJU5 478 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 MYLKQ15746 1914 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CYR61O00622 381 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 RPL27P61353 136 aaKnown RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 ARF1P84077 181 aaKnown RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 PNRC1Q12796 327 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 NKAIN1Q4KMZ8 207 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 GRINAQ7Z429 371 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ABHD12BQ7Z5M8 362 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 SUMF1Q8NBK3 374 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 NT5CQ8TCD5 201 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ABHD5Q8WTS1 349 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 LIN37Q96GY3 246 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 TIMM29Q9BSF4 260 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ZNF264O43296 627 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 TLX3O43711 291 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 PGA3P0DJD8 388 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 KIR2DS3Q14952 304 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CPEB2Q7Z5Q1 589 aaKnown RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 ARHGEF39Q8N4T4 335 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 TECTBQ96PL2 329 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 NECAP2Q9NVZ3 263 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 DAPP1Q9UN19 280 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 EP300Q09472 2414 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 THBS4P35443 961 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 PTPMT1Q8WUK0 201 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 C22orf15Q8WYQ4 148 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 VN1R1Q9GZP7 353 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 SLC31A1O15431 190 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 HPRT1P00492 218 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 GALR1P47211 349 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 HIST1H3AP68431 136 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CST9Q5W186 159 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CORO2AQ92828 525 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 IL22RA2Q969J5 263 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 C4orf51C9J302 202 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CDC14BO60729 498 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 TPPP2P59282 170 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 SUMO1P63165 101 aaKnown RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 FKBP1BP68106 108 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ZNF787Q6DD87 383 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 FBXW12Q6X9E4 464 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 ZNF709Q8N972 641 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 OR2A1Q8NGT9 310 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 OR4X1Q8NH49 305 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 STARD5Q9NSY2 213 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 SLC39A9Q9NUM3 307 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 COA3Q9Y2R0 106 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 CTSVO60911 334 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 GLI4P10075 376 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 TDGF1P3P51864 188 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 H1FNTQ75WM6 255 aaPredicted RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 TIPARPQ7Z3E1 657 aaKnown RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 LRRC75AQ8NAA5 344 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 KREMEN2Q8NCW0 462 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 OR5L1Q8NGL2 311 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 LRP12Q9Y561 859 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 LIPGQ9Y5X9 500 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 TP53I11O14683 189 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 CLN3Q13286 438 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 MEX3BQ6ZN04 569 aaKnown RBP4.45□□□□□ -1.7
HERC1-201ENST00000443617 TBX15Q96SF7 602 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 IL21Q9HBE4 155 aa4.45□□□□□ -1.7
HERC1-201ENST00000443617 MMP25Q9NPA2 562 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms