RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ZCCHC4Q9H5U6 513 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 METTL17Q9H7H0 456 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 KAAG1Q9UBP8 84 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 CLN8Q9UBY8 286 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 OR5V1Q9UGF6 321 aa9.06□□□□□ -0.96
HDAC6-211ENST00000443563 POLR3KQ9Y2Y1 108 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-211ENST00000443563 NKX6-3A6NJ46 265 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 MAGEB3O15480 346 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 AKR7A2O43488 359 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 ADAM20O43506 726 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 DENRO43583 198 aaKnown RBP9.05□□□□□ -0.96
HDAC6-211ENST00000443563 NOS1APO75052 506 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-211ENST00000443563 CRLF1O75462 422 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 ALX3O95076 343 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 GYPAP02724 150 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 CD1AP06126 327 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 PGA5P0DJD9 388 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 EGR1P18146 543 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 CRHBPP24387 322 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 MPZP25189 248 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 AZGP1P25311 298 aaKnown RBP9.05□□□□□ -0.96
HDAC6-211ENST00000443563 RBMXP38159 391 aaKnown RBP9.05□□□□□ -0.96
HDAC6-211ENST00000443563 LCN2P80188 198 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 ACSM1Q08AH1 577 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 IL24Q13007 206 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 SMIM21Q3B7S5 101 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 CHRFAM7AQ494W8 412 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 YIF1BQ5BJH7 314 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 DCAF12L2Q5VW00 463 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 CD276Q5ZPR3 534 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 DMKNQ6E0U4 476 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-211ENST00000443563 FAM90A1Q86YD7 464 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 MKXQ8IYA7 352 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 POC1AQ8NBT0 407 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 C19orf18Q8NEA5 215 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 OR10AC1Q8NH08 325 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 TRMT10AQ8TBZ6 339 aaKnown RBP9.05□□□□□ -0.96
HDAC6-211ENST00000443563 NPRL2Q8WTW4 380 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 MED30Q96HR3 178 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 BEX2Q9BXY8 128 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 DUSP21Q9H596 190 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 SVEP1Q4LDE5 3571 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 MALRD1Q5VYJ5 2156 aa9.05□□□□□ -0.96
HDAC6-211ENST00000443563 CSPG4Q6UVK1 2322 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 IGHV3OR15-7A0A075B7D8 119 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 TNFRSF13BO14836 293 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-211ENST00000443563 GPR37O15354 613 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 TMPRSS2O15393 492 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 SULT1B1O43704 296 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 RHBDL1O75783 438 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 LALBAP00709 142 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 CELP19835 753 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 EEF1B2P24534 225 aaKnown RBP9.04□□□□□ -0.96
HDAC6-211ENST00000443563 MTCP1P56278 107 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 CR1LQ2VPA4 569 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 DMRTC1Q5HYR2 192 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 FAM120AOSQ5T036 256 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 ATPAF1Q5TC12 328 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-211ENST00000443563 STUMQ69YW2 141 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 XAF1Q6GPH4 301 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 FAHD2BQ6P2I3 314 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-211ENST00000443563 LYPD2Q6UXB3 125 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 PRSS48Q7RTY5 328 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 Q8IYB0 196 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 OR13C9Q8NGT0 318 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 GHSRQ92847 366 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 FAHD2AQ96GK7 314 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 OPALINQ96PE5 141 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 YTHDF1Q9BYJ9 559 aaKnown RBP9.04□□□□□ -0.96
HDAC6-211ENST00000443563 CCDC90BQ9GZT6 254 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 PAK1IP1Q9NWT1 392 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-211ENST00000443563 NLKQ9UBE8 527 aa9.04□□□□□ -0.96
HDAC6-211ENST00000443563 DOCK11Q5JSL3 2073 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 IGKV1-9A0A0C4DH69 117 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 OR2AT4A6NND4 320 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 TRAPPC2LH3BP13 241 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 PHF1O43189 567 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 NDUFB3O43676 98 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 SYNGR1O43759 233 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 MRPS14O60783 128 aaKnown RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 NXPH2O95156 264 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 ECDO95905 644 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 HCKP08631 526 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 RAB3AP20336 220 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 ZFP36P26651 326 aaKnown RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 MAPK3P27361 379 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 SOX2P48431 317 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 GABARAPL2P60520 117 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 GMFBP60983 142 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 SEC61A1P61619 476 aaKnown RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 PPP3R1P63098 170 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 IL13RA1P78552 427 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 SCGB2A2Q13296 93 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 SPHARQ15513 63 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 MED22Q15528 200 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 Q499Y3 187 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 LRRC10Q5BKY1 277 aa9.03□□□□□ -0.96
HDAC6-211ENST00000443563 WDR25Q64LD2 544 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-211ENST00000443563 FIP1L1Q6UN15 594 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms