RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SSX6Q7RTT6 188 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 LINC00469Q8N7U9 141 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 SPERTQ8NA61 448 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 UFD1Q92890 307 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 JMJD8Q96S16 334 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 SP140LQ9H930 580 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 PNRC2Q9NPJ4 139 aaKnown RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 OR5V1Q9UGF6 321 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 LRP12Q9Y561 859 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 GGT3PA6NGU5 568 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 CEACAM18A8MTB9 384 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 PSKH1P11801 424 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 JUNBP17275 347 aaPredicted RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 OPRL1P41146 370 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 OR12D2P58182 307 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 SEC61A1P61619 476 aaKnown RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 RELBQ01201 579 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 CCDC58Q4VC31 144 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 ARMCX4Q5H9R4 360 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 DRAM2Q6UX65 266 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 C1QL2Q7Z5L3 287 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 GPR141Q7Z602 305 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 KLBQ86Z14 1044 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 MGLLQ99685 303 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 MRI1Q9BV20 369 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 NCOR1P1Q9H4R4 102 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 MMP26Q9NRE1 261 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 UFSP2Q9NUQ7 469 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 ACOXLQ9NUZ1 547 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 BABAM2Q9NXR7 383 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 MRM2Q9UI43 246 aaKnown RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 LSM2Q9Y333 95 aaKnown RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 NOP16Q9Y3C1 178 aaKnown RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 AUP1Q9Y679 476 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 POMT1Q9Y6A1 747 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 PPIAL4EA0A075B759 164 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 PPIAL4CA0A0B4J2A2 164 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 PPIAL4DF5H284 164 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 PSMD9O00233 223 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 SCGB1D1O95968 90 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 PPIAL4FP0DN26 164 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 SLC2A1P11166 492 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 CA6P23280 308 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 CAMLGP49069 296 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 TGM4P49221 684 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 ACSM1Q08AH1 577 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 OR8G1Q15617 311 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 SNAI3Q3KNW1 292 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 XAF1Q6GPH4 301 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.34□□□□□ -1.23
USP6NL-203ENST00000443016 OR11L1Q8NGX0 322 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 OR2AE1Q8NHA4 323 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 PELI1Q96FA3 418 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 OR5M11Q96RB7 305 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 AMELYQ99218 206 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 KCNJ15Q99712 375 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF649Q9BS31 505 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 C1orf43Q9BWL3 253 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 SSBP3Q9BWW4 388 aaPredicted RBP7.34□□□□□ -1.23
USP6NL-203ENST00000443016 SUCNR1Q9BXA5 334 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 SLC22A4Q9H015 551 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 SMURF1Q9HCE7 757 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 PPIAL4AQ9Y536 164 aa7.34□□□□□ -1.23
USP6NL-203ENST00000443016 TRAV34A0A0B4J273 112 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 CD300LBA8K4G0 201 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 LOC110117498-PIK3R3F6TDL0 507 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 TRIM77I1YAP6 450 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 MAGEB3O15480 346 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 NOL3O60936 208 aaKnown RBP7.34□□□□□ -1.24
USP6NL-203ENST00000443016 RPP14O95059 124 aaKnown RBP7.34□□□□□ -1.24
USP6NL-203ENST00000443016 CX3CR1P49238 355 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 HILS1P60008 231 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 GNB2P62879 340 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 ZNF92Q03936 586 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 ZNF154Q13106 437 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 KRTAP27-1Q3LI81 207 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 ZNF684Q5T5D7 378 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 SYT6Q5T7P8 510 aaPredicted RBP7.34□□□□□ -1.24
USP6NL-203ENST00000443016 SLC25A24Q6NUK1 477 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 RPL22L1Q6P5R6 122 aaKnown RBP7.34□□□□□ -1.24
USP6NL-203ENST00000443016 BTNL3Q6UXE8 466 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 C12orf54Q6X4T0 127 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 USP43Q70EL4 1123 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 DEFB108BQ8NET1 73 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 OR56B2PQ8NGI1 322 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 OR10S1Q8NGN2 331 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 CMTM3Q96MX0 182 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 SLC6A7Q99884 636 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 ADAT1Q9BUB4 502 aaKnown RBP7.34□□□□□ -1.24
USP6NL-203ENST00000443016 COMMD4Q9H0A8 199 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 ISG20L2Q9H9L3 353 aaKnown RBP7.34□□□□□ -1.24
USP6NL-203ENST00000443016 TMEM165Q9HC07 324 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 MIOXQ9UGB7 285 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 FBXL7Q9UJT9 491 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 R4GMQ9 66 aa7.34□□□□□ -1.24
USP6NL-203ENST00000443016 A0A1W2PRV1 198 aa7.33□□□□□ -1.24
USP6NL-203ENST00000443016 TRAPPC2LH3BP13 241 aa7.33□□□□□ -1.24
USP6NL-203ENST00000443016 CCRL2O00421 344 aa7.33□□□□□ -1.24
USP6NL-203ENST00000443016 ANXA2P07355 339 aaKnown RBP7.33□□□□□ -1.24
USP6NL-203ENST00000443016 PSMA1P25786 263 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms