RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PIN1P1O15428 100 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 MRPS14O60783 128 aaKnown RBP13.39□□□□□ -0.27
USP39-205ENST00000442708 FCN3O75636 299 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 PLATP00750 562 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 GYPAP02724 150 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 ZNF16P17020 682 aaPredicted RBP13.39□□□□□ -0.27
USP39-205ENST00000442708 TPBGQ13641 420 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 CNN3Q15417 329 aaKnown RBP13.39□□□□□ -0.27
USP39-205ENST00000442708 Q499Y3 187 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 LIPKQ5VXJ0 399 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 OR5D14Q8NGL3 314 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 RFT1Q96AA3 541 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 BORCS8Q96FH0 119 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 MGLLQ99685 303 aa13.39□□□□□ -0.27
USP39-205ENST00000442708 PATZ1Q9HBE1 687 aaKnown RBP13.39□□□□□ -0.27
USP39-205ENST00000442708 NSD1Q96L73 2696 aaPredicted RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 TRAV8-7A0A075B6U6 113 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 A0A1B0GW55 424 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 ZNF879B4DU55 563 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 F8VVB4 439 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 F8VWA3 439 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 SULT1B1O43704 296 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 CD5LO43866 347 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 ALX3O95076 343 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 WNT2P09544 360 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DUX4L2P0CJ85 424 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DUX4L3P0CJ86 424 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DUX4L4P0CJ87 422 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DUX4L5P0CJ88 424 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DUX4L6P0CJ89 424 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DUX4L7P0CJ90 424 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 PGA5P0DJD9 388 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 CPEP16870 476 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 IGFBP3P17936 291 aaPredicted RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 AMY2BP19961 511 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 PRKACBP22694 351 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 ZFP36P26651 326 aaKnown RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 GZMKP49863 264 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 GP2P55259 537 aaKnown RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 MTCP1P56278 107 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 RPS25P62851 125 aaKnown RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 MLLT11Q13015 90 aaPredicted RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 KCTD21Q4G0X4 260 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 CYB5R2Q6BCY4 276 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 ZNF773Q6PK81 442 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DUX4L9Q6RFH8 374 aaPredicted RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 UNQ9370/PRO34162Q6UXP9 181 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 ZNF367Q7RTV3 350 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 PHC2Q8IXK0 858 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 MUC20Q8N307 709 aaPredicted RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 SPICQ8N5J4 248 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 POC1AQ8NBT0 407 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 SPSB1Q96BD6 273 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DERL3Q96Q80 235 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 NKX3-1Q99801 234 aaPredicted RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 TMED9Q9BVK6 235 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 PKIBQ9C010 78 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 LPAR2Q9HBW0 351 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 SNTG1Q9NSN8 517 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 MTCH1Q9NZJ7 389 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 CTSZQ9UBR2 303 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 DUX4Q9UBX2 424 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 SF3B6Q9Y3B4 125 aaKnown RBP13.38□□□□□ -0.27
USP39-205ENST00000442708 NF1P21359 2839 aa13.38□□□□□ -0.27
USP39-205ENST00000442708 MAGEA13PA6NCF6 341 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 NOS1APO75052 506 aaPredicted RBP13.37□□□□□ -0.27
USP39-205ENST00000442708 INMTO95050 263 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 CD2P06729 351 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 HEXAP06865 529 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 RBP2P50120 134 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 ATP1B3P54709 279 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 ERVK11-1P61568 191 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 IL24Q13007 206 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 GPR50Q13585 617 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 SSX1Q16384 188 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 FAM27D1Q5T7N8 215 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 SLC25A26Q70HW3 274 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 OR52N4Q8NGI2 321 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 ZNF671Q8TAW3 534 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 UFD1Q92890 307 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 TMEM203Q969S6 136 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 SLAMF9Q96A28 289 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 NRIP2Q9BQI9 281 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 PPIL3Q9H2H8 161 aaKnown RBP13.37□□□□□ -0.27
USP39-205ENST00000442708 PCDHB10Q9UN67 800 aa13.37□□□□□ -0.27
USP39-205ENST00000442708 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 TRAV38-1A0A0B4J264 116 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 IGKV1-12A0A0C4DH73 117 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 KIAA1324LA8MWY0 1029 aaPredicted RBP13.36□□□□□ -0.27
USP39-205ENST00000442708 SPRY1O43609 319 aaPredicted RBP13.36□□□□□ -0.27
USP39-205ENST00000442708 SC5DO75845 299 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 TGFAP01135 160 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 IGKV1D-12P01611 117 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 MUC1P15941 1255 aaPredicted RBP13.36□□□□□ -0.27
USP39-205ENST00000442708 RAB3AP20336 220 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 POU3F4P49335 361 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 ACSM3Q53FZ2 586 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 ARMCX4Q5H9R4 360 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 UBE2UQ5VVX9 321 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms