RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 OTX1P32242 354 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 KIR2DL2P43627 348 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 PSG4Q00888 419 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 NHLH2Q02577 135 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 TGFBR3Q03167 851 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF774Q6NX45 483 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 TMEM88Q6PEY1 159 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 CBLN2Q8IUK8 224 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 ZFP82Q8N141 532 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 MBD3L2Q8NHZ7 208 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 FAM57AQ8TBR7 257 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF799Q96GE5 643 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 SYT7O43581 403 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 SYNGR3O43761 229 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 CNOT4O95628 575 aaKnown RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 MMP7P09237 267 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 OR4E1P0C645 316 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 HIST1H1BP16401 226 aaKnown RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 BTCP35070 178 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 TDGF1P3P51864 188 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 C1orf185Q5T7R7 199 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 ANKRD16Q6P6B7 361 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 FAM57BQ71RH2 274 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 NR2C2APQ86WQ0 139 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 Q8N402 240 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 SLC24A4Q8NFF2 622 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 OR8B12Q8NGG6 310 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 OR13C3Q8NGS6 347 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 FGFBP3Q8TAT2 258 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 ASB5Q8WWX0 329 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 SNRNP40Q96DI7 357 aaKnown RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 PGAM5Q96HS1 289 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 DIRAS2Q96HU8 199 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 SLC25A18Q9H1K4 315 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 A0A1B0GW55 424 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 MED19A0JLT2 244 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 OR6C6A6NF89 314 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 PRRG2O14669 202 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 KDM4BO94953 1096 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 IL18BPO95998 194 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ITGA5P08648 1049 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DBHP09172 617 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DUX4L2P0CJ85 424 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DUX4L3P0CJ86 424 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DUX4L4P0CJ87 422 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DUX4L5P0CJ88 424 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DUX4L6P0CJ89 424 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DUX4L7P0CJ90 424 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 CRYGSP22914 178 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 OR10A3P58181 314 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ZP1P60852 638 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 RAB2AP61019 212 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 TNFRSF9Q07011 255 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 FABP9Q0Z7S8 132 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 HNF4GQ14541 408 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 RSPO1Q2MKA7 263 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 SFXN4Q6P4A7 337 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 MZT2AQ6P582 158 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DRAM2Q6UX65 266 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 COMMD2Q86X83 199 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF433Q8N7K0 673 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF383Q8NA42 475 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 COQ8AQ8NI60 647 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 OR51E1Q8TCB6 317 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ACOT12Q8WYK0 555 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 CKLFQ9UBR5 152 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 DUX4Q9UBX2 424 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 AK6Q9Y3D8 172 aaKnown RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 PHF3Q92576 2039 aaKnown RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 TMEM8BA6NDV4 472 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 IL2RAP01589 272 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 HLA-HP01893 362 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 CD79AP11912 226 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 RCC1P18754 421 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 THBS2P35442 1172 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ARR3P36575 388 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 PKIAP61925 76 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 FOXF2Q12947 444 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 HLXQ14774 488 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 TMEM255AQ5JRV8 349 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 IDNKQ5T6J7 187 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 RTL6Q6ICC9 239 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 VWA1Q6PCB0 445 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 GFRALQ6UXV0 394 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 STAC2Q6ZMT1 411 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 Q6ZT83 130 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 PRSS45Q7RTY3 260 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 SPAG16Q8N0X2 631 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 OR1K1Q8NGR3 316 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 TRMT10AQ8TBZ6 339 aaKnown RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 SLAMF9Q96A28 289 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 KCTD12Q96CX2 325 aaKnown RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ZFP3Q96NJ6 502 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 SLC17A5Q9NRA2 495 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ASF1BQ9NVP2 202 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 FAM215AQ9Y5M1 114 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 LAMA5O15230 3695 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 CHD8Q9HCK8 2581 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 PIEZO2Q9H5I5 2752 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 A0A0G2JK05 382 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms