RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 FABP6P51161 128 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CCR9P51686 369 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 TMBIM6P55061 237 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 TAS2R43P59537 309 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 PCBD1P61457 104 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 VBP1P61758 197 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 RAB1AP62820 205 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GRB2P62993 217 aaKnown RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GALK2Q01415 458 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 SCRN3Q0VDG4 424 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GPR50Q13585 617 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 SPCS2Q15005 226 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 P2RY6Q15077 328 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 TAB1Q15750 504 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GSG1Q2KHT4 349 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ODF4Q2M2E3 257 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CNPY1Q3B7I2 92 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF829Q3KNS6 432 aaPredicted RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 SNAI3Q3KNW1 292 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 SLC36A2Q495M3 483 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CCDC58Q4VC31 144 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 FAM27D1Q5T7N8 215 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 C22orf42Q6IC83 251 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ASPHD2Q6ICH7 369 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 UNQ9370/PRO34162Q6UXP9 181 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 Q6ZRM9 215 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 COLCA1Q6ZS62 124 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 FAM57BQ71RH2 274 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 RHOUQ7L0Q8 258 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 P2RY8Q86VZ1 359 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 EGFL6Q8IUX8 553 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ELMOD2Q8IZ81 293 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF283Q8N7M2 679 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 OR8B12Q8NGG6 310 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF420Q8TAQ5 688 aaPredicted RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 NDNFQ8TB73 568 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GHSRQ92847 366 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ORAI1Q96D31 301 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 DGCR14Q96DF8 476 aaKnown RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 MRPL48Q96GC5 212 aaKnown RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 SLC6A7Q99884 636 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CHCHD6Q9BRQ6 235 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 WACQ9BTA9 647 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 C1QTNF6Q9BXI9 259 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 FAM192AQ9GZU8 254 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 PBOV1Q9GZY1 135 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 HDHD2Q9H0R4 259 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 POFUT1Q9H488 388 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 RNF121Q9H920 327 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 HIF1ANQ9NWT6 349 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 TXNL4BQ9NX01 149 aaKnown RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 NPAP1Q9NZP6 1156 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 RSL24D1Q9UHA3 163 aaKnown RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 NUFIP1Q9UHK0 495 aaKnown RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 OR52A1Q9UKL2 312 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 STUB1Q9UNE7 303 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 PPIAL4AQ9Y536 164 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 MMP24Q9Y5R2 645 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 DOCK11Q5JSL3 2073 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TET2Q6N021 2002 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TRBV5-7A0A0A0MS05 114 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 IGHV1-18A0A0C4DH31 117 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 LOC100506127A0A0U1RQW1 187 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 LOC107986453A0A1B0GWG9 222 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TRDV1A0A1B0GX56 115 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 A0A1W2PPW3 197 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 ACOD1A6NK06 481 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TMEM212A6NML5 194 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 KRTAP29-1A8MX34 341 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 E7EQL1 145 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 LOC110117498-PIK3R3F6TDL0 507 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 M0R135 149 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 P2RY10O00398 339 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 NGFP01138 241 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 IGKV3-15P01624 115 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 IGLV1-44P01699 117 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 SERPINA5P05154 406 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 CECR9P0C854 216 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 CBR1P16152 277 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 CCL1P22362 96 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 STOMP27105 288 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 HSD11B1P28845 292 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 CALCRP30988 508 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 FGF9P31371 208 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 ARR3P36575 388 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 WNT5AP41221 380 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 SOX2P48431 317 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 IDH3GP51553 393 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 UBE2NP61088 152 aaKnown RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TGFBR3Q03167 851 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 ECH1Q13011 328 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 MRPL28Q13084 256 aaKnown RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TAF13Q15543 124 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 FAM189A2Q15884 450 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 ACSM3Q53FZ2 586 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TMEM255AQ5JRV8 349 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 GLYATL3Q5SZD4 288 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TMEM53Q6P2H8 277 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms