RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SELENOIQ9C0D9 397 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
LIMD1-202ENST00000440097 FAM96BQ9Y3D0 163 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF736B4DX44 427 aaPredicted RBP12.39□□□□□ -0.43
LIMD1-202ENST00000440097 EEF1E1-BLOC1S5C9J1V9 151 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 CYB5AP00167 134 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 HEXAP06865 529 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 HCKP08631 526 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 NTF4P34130 210 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 GFRA1P56159 465 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 PPP1R1AQ13522 171 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 VASH2Q86V25 355 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 FOXRED1Q96CU9 486 aaPredicted RBP12.39□□□□□ -0.43
LIMD1-202ENST00000440097 PRRG4Q9BZD6 226 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 TMEM100Q9NV29 134 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF716A6NP11 495 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 TTLL8A6PVC2 850 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 DBHP09172 617 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 SMIM6P0DI80 62 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 TPT1P13693 172 aaKnown RBP12.38□□□□□ -0.43
LIMD1-202ENST00000440097 ZBTB25P24278 435 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF93P35789 620 aaPredicted RBP12.38□□□□□ -0.43
LIMD1-202ENST00000440097 NKAPLQ5M9Q1 402 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 FAM166AQ6J272 317 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 LYG2Q86SG7 212 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 SKA3Q8IX90 412 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF101Q8IZC7 436 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 SLC22A24Q8N4F4 322 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 ACBD4Q8NC06 268 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 OR4S1Q8NGB4 309 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 GPER1Q99527 375 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 CST11Q9H112 138 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 ACKR4Q9NPB9 350 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 MMP26Q9NRE1 261 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 CHD8Q9HCK8 2581 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 A0A0B4J2A0 478 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 RAB5BP61020 215 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 PEA15Q15121 130 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 AWAT2Q6E213 333 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 CD163Q86VB7 1156 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 OR10R2Q8NGX6 335 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 STOML3Q8TAV4 291 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 NPRL2Q8WTW4 380 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 RNF141Q8WVD5 230 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 FBXO17Q96EF6 278 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF251Q9BRH9 671 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 SHPKQ9UHJ6 478 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 TPRP12270 2363 aaKnown RBP12.38□□□□□ -0.43
LIMD1-202ENST00000440097 ACACAQ13085 2346 aa12.38□□□□□ -0.43
LIMD1-202ENST00000440097 COLCA2A8K830 154 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 M0R135 149 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 CD74P04233 296 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 S100A9P06702 114 aaKnown RBP12.37□□□□□ -0.43
LIMD1-202ENST00000440097 ARG2P78540 354 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 PMPCAQ10713 525 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 RSPO4Q2I0M5 234 aaPredicted RBP12.37□□□□□ -0.43
LIMD1-202ENST00000440097 BAP18Q8IXM2 172 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 CHST4Q8NCG5 386 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 CASTOR1Q8WTX7 329 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 SPTSSAQ969W0 71 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF799Q96GE5 643 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 ADGRG7Q96K78 797 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 NIT2Q9NQR4 276 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 SLC17A5Q9NRA2 495 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 KLK13Q9UKR3 277 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 KIAA1549Q9HCM3 1950 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 C5orf63A6NC05 138 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 F8VVB4 439 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 F8VWA3 439 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 ERCC1P07992 297 aaPredicted RBP12.37□□□□□ -0.43
LIMD1-202ENST00000440097 CFPP27918 469 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 MRPS34P82930 218 aaKnown RBP12.37□□□□□ -0.43
LIMD1-202ENST00000440097 ECH1Q13011 328 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 RBM39Q14498 530 aaKnown RBP12.37□□□□□ -0.43
LIMD1-202ENST00000440097 MST1LQ2TV78 715 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 CEACAM16Q2WEN9 425 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 DOK3Q7L591 496 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 RNF144BQ7Z419 303 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 SLC25A42Q86VD7 318 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 PAQR4Q8N4S7 273 aaPredicted RBP12.37□□□□□ -0.43
LIMD1-202ENST00000440097 TMEM251Q8N6I4 163 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 SLC30A7Q8NEW0 376 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 DCUN1D4Q92564 292 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 NRIP2Q9BQI9 281 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 TINAGQ9UJW2 476 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 NOSIPQ9Y314 301 aaKnown RBP12.37□□□□□ -0.43
LIMD1-202ENST00000440097 MRPS18CQ9Y3D5 142 aaKnown RBP12.37□□□□□ -0.43
LIMD1-202ENST00000440097 CSAG2Q9Y5P2 127 aa12.37□□□□□ -0.43
LIMD1-202ENST00000440097 C9orf170A2RU37 121 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 METTL21EPA6NDL7 271 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 MRPL33O75394 65 aaKnown RBP12.36□□□□□ -0.43
LIMD1-202ENST00000440097 HLA-GP17693 338 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 MEOX1P50221 254 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 PJVKQ0ZLH3 352 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 TSC22D1Q15714 1073 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 C9orf135Q5VTT2 229 aa12.36□□□□□ -0.43
LIMD1-202ENST00000440097 PIP4P1Q86T03 277 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms