RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 AANATQ16613 207 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 NHLRC3Q5JS37 347 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 TOR2AQ5JU69 321 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 ALKAL2Q6UX46 152 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 C6orf201Q7Z4U5 140 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 KCNRGQ8N5I3 272 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 MDS2Q8NDY4 140 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 OR6K3Q8NGY3 331 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 CMSS1Q9BQ75 279 aaKnown RBP9.06□□□□□ -0.96
CPNE1-218ENST00000439806 C1QTNF5Q9BXJ0 243 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 LDAHQ9H6V9 325 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 FN3KRPQ9HA64 309 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 BCO1Q9HAY6 547 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 PFDN2Q9UHV9 154 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 SESN1Q9Y6P5 492 aa9.06□□□□□ -0.96
CPNE1-218ENST00000439806 IGKV1-27A0A075B6S5 117 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 A0A096LPE4 126 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 A0A1W2PPZ6 126 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 hCG_1807616A0A1W2PRN6 198 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 ARGFXA6NJG6 315 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 CEACAM18A8MTB9 384 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 RRP8O43159 456 aaKnown RBP9.05□□□□□ -0.96
CPNE1-218ENST00000439806 BCL2L11O43521 198 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 SPDEFO95238 335 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 CD79AP11912 226 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 CD82P27701 267 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 MPGP29372 298 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 ARR3P36575 388 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 RRADP55042 308 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 ARG2P78540 354 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 CYCSP99999 105 aaKnown RBP9.05□□□□□ -0.96
CPNE1-218ENST00000439806 PLP2Q04941 152 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 MALLQ13021 153 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 ZNF345Q14585 488 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 SLC10A1Q14973 349 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 ATXN7L3Q14CW9 347 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-218ENST00000439806 SURF2Q15527 256 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-218ENST00000439806 OR8B8Q15620 311 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 TRIP6Q15654 476 aaKnown RBP9.05□□□□□ -0.96
CPNE1-218ENST00000439806 TAF9Q16594 264 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 NSUN5P2Q63ZY6 315 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 ASCL4Q6XD76 172 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 MRPL21Q7Z2W9 205 aaKnown RBP9.05□□□□□ -0.96
CPNE1-218ENST00000439806 LHFPL1Q86WI0 220 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 CCDC28AQ8IWP9 274 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 OSR2Q8N2R0 312 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 NAXEQ8NCW5 288 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 CPEB3Q8NE35 698 aaKnown RBP9.05□□□□□ -0.96
CPNE1-218ENST00000439806 PXT1Q8NFP0 134 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 FNDC9Q8TBE3 224 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 LRRC20Q8TCA0 184 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 PPP1R1CQ8WVI7 109 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 SPSB4Q96A44 273 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 TMEM230Q96A57 120 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 MARVELD3Q96A59 401 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 CYYR1Q96J86 154 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 VRK1Q99986 396 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-218ENST00000439806 C5orf66Q9H5L9 145 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 IL36GQ9NZH8 169 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 AK3Q9UIJ7 227 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 HSF4Q9ULV5 492 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 EDARQ9UNE0 448 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 TNFSF18Q9UNG2 199 aa9.05□□□□□ -0.96
CPNE1-218ENST00000439806 FIGNL2A6NMB9 653 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 ZNF850A8MQ14 1090 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 PDGFAP04085 211 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 RRASP10301 218 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 PI3P19957 117 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 CCNOP22674 350 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 DTYMKP23919 212 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 CHATP28329 748 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 NUP62P37198 522 aaPredicted RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 BAMBIQ13145 260 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 C3AR1Q16581 482 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 CLEC18BQ6UXF7 455 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 ZSCAN4Q8NAM6 433 aaPredicted RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 TMEM178AQ8NBL3 297 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 INO80EQ8NBZ0 244 aaPredicted RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 ST8SIA2Q92186 375 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 MRPS24Q96EL2 167 aaKnown RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 RTBDNQ9BSG5 229 aaPredicted RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 HDHD3Q9BSH5 251 aaPredicted RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 FAAP24Q9BTP7 215 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 PAPOLGQ9BWT3 736 aaKnown RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 NMES1Q9C002 83 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 DEFB127Q9H1M4 99 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 METTL8Q9H825 291 aaKnown RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 CHMP1AQ9HD42 196 aaPredicted RBP9.04□□□□□ -0.96
CPNE1-218ENST00000439806 RAB18Q9NP72 206 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 NECAP2Q9NVZ3 263 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 MBD2Q9UBB5 411 aa9.04□□□□□ -0.96
CPNE1-218ENST00000439806 TNRC6AQ8NDV7 1962 aaKnown RBP9.03□□□□□ -0.96
CPNE1-218ENST00000439806 TRGV5A0A0B4J1U4 118 aa9.03□□□□□ -0.96
CPNE1-218ENST00000439806 IGKV1-12A0A0C4DH73 117 aa9.03□□□□□ -0.96
CPNE1-218ENST00000439806 DBX1A6NMT0 343 aa9.03□□□□□ -0.96
CPNE1-218ENST00000439806 GALR2O43603 387 aaPredicted RBP9.03□□□□□ -0.96
CPNE1-218ENST00000439806 IGKV1D-12P01611 117 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms