RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RER1O15258 196 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 RRADP55042 308 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF121P58317 390 aaPredicted RBP11.9□□□□□ -0.5
PCNX3-202ENST00000439247 DEFA6Q01524 100 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 HAGHQ16775 308 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 UBALD2Q8IYN6 164 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 SPEM1Q8N4L4 309 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 OR10D4PQ8NGN7 298 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 OR1J1Q8NGS3 322 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 TOMM40LQ969M1 308 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 C5orf34Q96MH7 638 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 SLC46A1Q96NT5 459 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 C14orf166Q9Y224 244 aaKnown RBP11.9□□□□□ -0.5
PCNX3-202ENST00000439247 POLR1DQ9Y2S0 133 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 SELLP14151 372 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 HOXA5P20719 270 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 PMELP40967 661 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 OPN5Q6U736 354 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 OR56B1Q8NGI3 324 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 GPBAR1Q8TDU6 330 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 MEGF10Q96KG7 1140 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 OR10A2Q9H208 303 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 PRO1933Q9H354 126 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 C1orf123Q9NWV4 160 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 ASXL3Q9C0F0 2248 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 CDRT15L2A8MXV6 281 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 K7ESF4 209 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 MSTNO14793 375 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 GAPDHP04406 335 aaKnown RBP11.89□□□□□ -0.51
PCNX3-202ENST00000439247 RAP1AP62834 184 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 SLC35A1P78382 337 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 HSF1Q00613 529 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 HMGN3Q15651 99 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 NUP54Q7Z3B4 507 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 LYZL2Q7Z4W2 148 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 CCDC54Q8NEL0 328 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 SLC35B3Q9H1N7 401 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 LHFPL6Q9Y693 200 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 IGHV5-51A0A0C4DH38 117 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 FIGNL2A6NMB9 653 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 ALG1L2C9J202 215 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 TSPAN2O60636 221 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 TNFP01375 233 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 IFNA17P01571 189 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 IGHMP01871 453 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 IGKV3-11P04433 115 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 AKT2P31751 481 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 APOBEC1P41238 236 aaKnown RBP11.89□□□□□ -0.51
PCNX3-202ENST00000439247 RAB5CP51148 216 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 PRSS12P56730 875 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 TLE3Q04726 772 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 ZNF674Q2M3X9 581 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 FAM57BQ71RH2 274 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 OR52M1Q8NGK5 317 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 MFSD8Q8NHS3 518 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 EMG1Q92979 244 aaKnown RBP11.89□□□□□ -0.51
PCNX3-202ENST00000439247 C14orf144Q96I85 54 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 YPEL4Q96NS1 127 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 CHST5Q9GZS9 411 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
PCNX3-202ENST00000439247 IGHV3-20A0A0C4DH32 117 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 H0YL77 283 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 SLC33A1O00400 549 aaPredicted RBP11.88□□□□□ -0.51
PCNX3-202ENST00000439247 HOXC4P09017 264 aaPredicted RBP11.88□□□□□ -0.51
PCNX3-202ENST00000439247 GABRR1P24046 479 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 ZXDAP98168 799 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 C14orf28Q4W4Y0 310 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 BRICD5Q6PL45 260 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 CRIP3Q6Q6R5 217 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 HIST2H3AQ71DI3 136 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 SULF2Q8IWU5 870 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 DYRK2Q92630 601 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 PECRQ9BY49 303 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 GPR61Q9BZJ8 451 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 PRDM13Q9H4Q3 707 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 LUZP4Q9P127 313 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 SHANK1Q9Y566 2161 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 TGIF2-C20orf24A0A0A6YYL0 155 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 STMND1H3BQB6 276 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 OPRM1P35372 400 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 ZNF84P51523 738 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 HLA-DQA1Q5Y7H0 255 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 GRINAQ7Z429 371 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 LILRB2Q8N423 598 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 NAXEQ8NCW5 288 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 Q8WTZ3 238 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 SCGB3A2Q96PL1 93 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 HS3ST3B1Q9Y662 390 aa11.88□□□□□ -0.51
PCNX3-202ENST00000439247 NCOA6Q14686 2063 aaPredicted RBP11.87□□□□□ -0.51
PCNX3-202ENST00000439247 A0A1W2PPC4 97 aa11.87□□□□□ -0.51
PCNX3-202ENST00000439247 RHPN2P1A8MT19 583 aa11.87□□□□□ -0.51
PCNX3-202ENST00000439247 TNFRSF10CO14798 259 aa11.87□□□□□ -0.51
PCNX3-202ENST00000439247 SCGNO76038 276 aa11.87□□□□□ -0.51
PCNX3-202ENST00000439247 CTSEP14091 401 aa11.87□□□□□ -0.51
PCNX3-202ENST00000439247 CDX1P47902 265 aaPredicted RBP11.87□□□□□ -0.51
PCNX3-202ENST00000439247 CXCL12P48061 93 aa11.87□□□□□ -0.51
PCNX3-202ENST00000439247 FXYD4P59646 89 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms