RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 FAM221BA6H8Z2 402 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 TMEM225BP0DP42 221 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 MMP9P14780 707 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 APLNRP35414 380 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 BIDP55957 195 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 PIGPP57054 158 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 NKX6-1P78426 367 aaPredicted RBP11.77□□□□□ -0.52
ACTN1-204ENST00000438964 ELOBQ15370 118 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 ZNF385CQ66K41 422 aaPredicted RBP11.77□□□□□ -0.52
ACTN1-204ENST00000438964 C19orf47Q8N9M1 422 aaKnown RBP11.77□□□□□ -0.52
ACTN1-204ENST00000438964 LIPHQ8WWY8 451 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 ADAM19Q9H013 955 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 SOHLH2Q9NX45 425 aa11.77□□□□□ -0.52
ACTN1-204ENST00000438964 ZNF107Q9UII5 783 aaPredicted RBP11.77□□□□□ -0.52
ACTN1-204ENST00000438964 FAM24AA6NFZ4 105 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF705GA8MUZ8 300 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-204ENST00000438964 TAAR5O14804 337 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 ANGPTL7O43827 346 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 AHSA1O95433 338 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 ADH1BP00325 375 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 TRGC1P0CF51 173 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 FUT7Q11130 342 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 ARMC6Q6NXE6 501 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 STT3BQ8TCJ2 826 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 C1orf123Q9NWV4 160 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 TBX21Q9UL17 535 aa11.77□□□□□ -0.53
ACTN1-204ENST00000438964 A6NCN8 305 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 PGA4P0DJD7 388 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 PGA5P0DJD9 388 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 HIST1H1BP16401 226 aaKnown RBP11.76□□□□□ -0.53
ACTN1-204ENST00000438964 SLC26A5P58743 744 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.76□□□□□ -0.53
ACTN1-204ENST00000438964 TMEM196Q5HYL7 178 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF880Q6PDB4 577 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 LMAN1LQ9HAT1 526 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 SLCO1B1Q9Y6L6 691 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 IGKV1-9A0A0C4DH69 117 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 PLRG1O43660 514 aaKnown RBP11.76□□□□□ -0.53
ACTN1-204ENST00000438964 FKTNO75072 461 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 CST7O76096 145 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 IFNA21P01568 189 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF121P58317 390 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-204ENST00000438964 SSTP61278 116 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 RND3P61587 244 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 RHEBQ15382 184 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 OPN5Q6U736 354 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 PEG10Q86TG7 708 aaKnown RBP11.76□□□□□ -0.53
ACTN1-204ENST00000438964 SGPP2Q8IWX5 399 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF248Q8NDW4 579 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 OR8B12Q8NGG6 310 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 OR10A2Q9H208 303 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 IGFLR1Q9H665 355 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 SLC31A2O15432 143 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 MPZP25189 248 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 EFNA3P52797 238 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 FAM3AP98173 230 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 HHEXQ03014 270 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 HMGN3Q15651 99 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 UBE2V2Q15819 145 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 VAX1Q5SQQ9 334 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 Q6ZSR6 202 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 OR13H1Q8NG92 308 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 OR2G3Q8NGZ4 309 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 ABHD5Q8WTS1 349 aa11.76□□□□□ -0.53
ACTN1-204ENST00000438964 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 MS4A18H0YCH9 400 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 TERTO14746 1132 aaKnown RBP11.75□□□□□ -0.53
ACTN1-204ENST00000438964 IL33O95760 270 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 NR2C1P13056 603 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 PLCXD2Q0VAA5 305 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 MS4A18Q3C1V0 323 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 TMEM176BQ3YBM2 270 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-204ENST00000438964 LHFPL1Q86WI0 220 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 HIST3H2BBQ8N257 126 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 OR10AD1Q8NGE0 317 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 PTX4Q96A99 478 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 MUC22E2RYF6 1773 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF850A8MQ14 1090 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 CYTIPO60759 359 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 APODP05090 189 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 ISG15P05161 165 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF429Q86V71 674 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 KCNG3Q8TAE7 436 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 LURAP1Q96LR2 239 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 PACRGQ96M98 296 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-204ENST00000438964 S100A13Q99584 98 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 FAAP24Q9BTP7 215 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 OPA3Q9H6K4 179 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 SRPK3Q9UPE1 567 aa11.75□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF724A8MTY0 619 aa11.74□□□□□ -0.53
ACTN1-204ENST00000438964 MMP7P09237 267 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-204ENST00000438964 FAHP16930 419 aa11.74□□□□□ -0.53
ACTN1-204ENST00000438964 ZNF17P17021 662 aa11.74□□□□□ -0.53
ACTN1-204ENST00000438964 TUBG1P23258 451 aa11.74□□□□□ -0.53
ACTN1-204ENST00000438964 GFERP55789 205 aa11.74□□□□□ -0.53
ACTN1-204ENST00000438964 FBXW4P57775 412 aa11.74□□□□□ -0.53
ACTN1-204ENST00000438964 TLE3Q04726 772 aa11.74□□□□□ -0.53
ACTN1-204ENST00000438964 OR8G1Q15617 311 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms