RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TEX30Q5JUR7 227 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 LINC01590Q5TEZ4 76 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 LCN1P1Q5VSP4 162 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 EGFL6Q8IUX8 553 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 GLB1L2Q8IW92 636 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 Q8N7P7 452 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 CYB561A3Q8NBI2 242 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 Q8NFD4 153 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 C8orf46Q8TAG6 207 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 TNFRSF14Q92956 283 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 APOBEC3DQ96AK3 386 aaPredicted RBP9.03□□□□□ -0.96
CSTF3-203ENST00000438862 MNTQ99583 582 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 TEAD3Q99594 435 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 HCAR1Q9BXC0 346 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 PALMDQ9NP74 551 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 RPRD1BQ9NQG5 326 aaKnown RBP9.03□□□□□ -0.96
CSTF3-203ENST00000438862 POLE4Q9NR33 117 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 DNAJB11Q9UBS4 358 aa9.03□□□□□ -0.96
CSTF3-203ENST00000438862 SF3B6Q9Y3B4 125 aaKnown RBP9.03□□□□□ -0.96
CSTF3-203ENST00000438862 NOP16Q9Y3C1 178 aaKnown RBP9.03□□□□□ -0.96
CSTF3-203ENST00000438862 RPL36Q9Y3U8 105 aaKnown RBP9.03□□□□□ -0.96
CSTF3-203ENST00000438862 A0A1W2PRX2 142 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 FAM183AA6NL82 134 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 CHST1O43916 411 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 WBP4O75554 376 aaKnown RBP9.02□□□□□ -0.97
CSTF3-203ENST00000438862 GP2P55259 537 aaKnown RBP9.02□□□□□ -0.97
CSTF3-203ENST00000438862 LSM6P62312 80 aaKnown RBP9.02□□□□□ -0.97
CSTF3-203ENST00000438862 KLRD1Q13241 179 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 HABP2Q14520 560 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-203ENST00000438862 PCK2Q16822 640 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 C6orf141Q5SZD1 244 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 PRAMEF6Q5VXH4 476 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 UNQ9370/PRO34162Q6UXP9 181 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 PNKDQ8N490 385 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 PROKR2Q8NFJ6 384 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 APH1BQ8WW43 257 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 SLC7A6Q92536 515 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 RORBQ92753 470 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 MYCBPQ99417 103 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-203ENST00000438862 CDCA4Q9BXL8 241 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 PRSS22Q9GZN4 317 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 SLC22A4Q9H015 551 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 INPP5EQ9NRR6 644 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 ATPIF1Q9UII2 106 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 DNAH7Q8WXX0 4024 aa9.02□□□□□ -0.97
CSTF3-203ENST00000438862 MEGF11A6BM72 1044 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 OR6C6A6NF89 314 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 H7C1C5 153 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 DCTN6O00399 190 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 MRPS14O60783 128 aaKnown RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 ENTPD6O75354 484 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 PTBP3O95758 552 aaKnown RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 PIPP12273 146 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 SLC15A1P46059 708 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 LCN6P62502 163 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 HOXA4Q00056 320 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 PRB3Q04118 309 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 RAB40BQ12829 278 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 AQP6Q13520 282 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 APOFQ13790 326 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 RBM48Q5RL73 367 aaKnown RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 TEX36Q5VZQ5 186 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 SHFQ7M4L6 423 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 FAM90A1Q86YD7 464 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 SLC26A10Q8NG04 563 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 OR5AU1Q8NGC0 362 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 OR1F12Q8NHA8 337 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 TSSK2Q96PF2 358 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 MCRIP2Q9BUT9 160 aaKnown RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 OR51V1Q9H2C8 321 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 METTL8Q9H825 291 aaKnown RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 EMC7Q9NPA0 242 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 SCN3BQ9NY72 215 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 CNOT2Q9NZN8 540 aaKnown RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 BLOC1S6Q9UL45 172 aa9.01□□□□□ -0.97
CSTF3-203ENST00000438862 COA3Q9Y2R0 106 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 TSSC4Q9Y5U2 329 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-203ENST00000438862 EFCAB10A6NFE3 127 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 M0R1W7 72 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 F2RL2O00254 374 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 NDUFB3O43676 98 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 GMDSO60547 372 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 FADS2O95864 444 aaKnown RBP9□□□□□ -0.97
CSTF3-203ENST00000438862 LHBP01229 141 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 GHRHP01286 108 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 ALDOBP05062 364 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 SCG5P05408 212 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 CHRM2P08172 466 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 MUC1P15941 1255 aaPredicted RBP9□□□□□ -0.97
CSTF3-203ENST00000438862 GSTT1P30711 240 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 RPS7P62081 194 aaKnown RBP9□□□□□ -0.97
CSTF3-203ENST00000438862 BLMHQ13867 455 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 OR8G1Q15617 311 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 KLHL12Q53G59 568 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 SLC36A1Q7Z2H8 476 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 TIGD4Q8IY51 512 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 OR9Q1Q8NGQ5 310 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 OTULINQ96BN8 352 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 CNBD2Q96M20 576 aa9□□□□□ -0.97
CSTF3-203ENST00000438862 OR5M11Q96RB7 305 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms