RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 VAMP5O95183 116 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 IGLV3-19P01714 112 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 APODP05090 189 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 KCNE1P15382 129 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 CEACAM3P40198 252 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 UBE2NP61088 152 aaKnown RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 PRR3P79522 188 aaKnown RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 LIPEQ05469 1076 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 LOXL1Q08397 574 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 CDH17Q12864 832 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 MERTKQ12866 999 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 STK11Q15831 433 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZBTB6Q15916 424 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 MRPL23Q16540 153 aaKnown RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 LINC00483Q53H64 154 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 AVPI1Q5T686 147 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 KPRPQ5T749 579 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 FBXW9Q5XUX1 488 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 GUSBP11Q6P575 273 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 IGFL1Q6UW32 110 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 NPSR1Q6W5P4 371 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 Q6ZR03 302 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 TPGS1Q6ZTW0 290 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 SSX9Q7RTT3 188 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 LUZP2Q86TE4 346 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 WDR86Q86TI4 376 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 CMTM1Q8IZ96 169 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 GABRG1Q8N1C3 465 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 OR5B3Q8NH48 314 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 OR5K2Q8NHB8 316 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 C15orf40Q8WUR7 153 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 CAPSLQ8WWF8 208 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 FRZBQ92765 325 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 KLK6Q92876 244 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 TMEM230Q96A57 120 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 GSDMAQ96QA5 445 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 CAMK2N2Q96S95 79 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 SPIN2AQ99865 258 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 SPIN2BQ9BPZ2 258 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 PLA2G12AQ9BZM1 189 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 TCEAL2Q9H3H9 227 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 ANKRA2Q9H9E1 313 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 VPS37BQ9H9H4 285 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZNF355PQ9NSJ1 428 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 OPN4Q9UHM6 478 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 SAR1BQ9Y6B6 198 aa1.6□□□□□ -2.15
HMGB1P31-201ENST00000437242 ABCA2Q9BZC7 2435 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 PCNX1Q96RV3 2341 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 TRAV6A0A075B6T7 132 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 IGLV1-36A0A0B4J1U3 117 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 KBTBD11-OT1A0A1B0GTJ5 212 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ERICH2A1L162 156 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 OR6C74A6NCV1 312 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 SMKR1H3BMG3 65 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 PIRO00625 290 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 BPY2O14599 106 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 DNALI1O14645 258 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 RAD51CO43502 376 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 CDC40O60508 579 aaKnown RBP eCLIP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 YIF1AO95070 293 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 TNFSF15O95150 251 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ARG1P05089 322 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 RHOXF2BP0C7M4 288 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 UBTFL6P0CB48 400 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ERGP11308 486 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 TCN2P20062 427 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 RAB3AP20336 220 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 DTYMKP23919 212 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 STOMP27105 288 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 GTF2E2P29084 291 aaKnown RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ACOT2P49753 483 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 PRRX1P54821 245 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 EIF3EP60228 445 aaKnown RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 SYCNQ0VAF6 134 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 IFT88Q13099 833 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 TRAM2Q15035 370 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 RGNQ15493 299 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 KRTAP21-3Q3LHN1 58 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ABCA11PQ4W5N1 156 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ORMDL2Q53FV1 153 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 SOHLH1Q5JUK2 328 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 METTL21CQ5VZV1 264 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 CEMP1Q6PRD7 247 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 SPESP1Q6UW49 350 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 MBOAT1Q6ZNC8 495 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 NTM-AS1Q6ZSK4 140 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 NCCRP1Q6ZVX7 275 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ABHD12BQ7Z5M8 362 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZNF695Q8IW36 515 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 CNPY4Q8N129 248 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 PDCL2Q8N4E4 241 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 TTC29Q8NA56 475 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 CHST4Q8NCG5 386 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 LYPD6BQ8NI32 183 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 NRGNQ92686 78 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 C19orf60Q96EN9 201 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 NARS2Q96I59 477 aaKnown RBP1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 RNF157Q96PX1 679 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 ZNF382Q96SR6 550 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 SMR3AQ99954 134 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms