RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RAB5CP51148 216 aa9.13□□□□□ -0.95
CLSTN1-203ENST00000435891 TAS2R60P59551 318 aa9.13□□□□□ -0.95
CLSTN1-203ENST00000435891 ENDOGQ14249 297 aaKnown RBP9.13□□□□□ -0.95
CLSTN1-203ENST00000435891 KISS1Q15726 138 aa9.13□□□□□ -0.95
CLSTN1-203ENST00000435891 HLA-BQ31612 363 aa9.13□□□□□ -0.95
CLSTN1-203ENST00000435891 OR10D4PQ8NGN7 298 aa9.13□□□□□ -0.95
CLSTN1-203ENST00000435891 JSRP1Q96MG2 331 aaPredicted RBP9.13□□□□□ -0.95
CLSTN1-203ENST00000435891 GPR132Q9UNW8 380 aa9.13□□□□□ -0.95
CLSTN1-203ENST00000435891 KCNMB1Q16558 191 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 CLEC18BQ6UXF7 455 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 DOK3Q7L591 496 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 OR13G1Q8NGZ3 307 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 PGAM5Q96HS1 289 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ANAPC10Q9UM13 185 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 IGKV1D-8A0A087WSZ0 117 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 MSGN1A6NI15 193 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ACTL6AO96019 429 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 SERPINA2P20848 420 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 RPS10P46783 165 aaKnown RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 GSK3AP49840 483 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ARFRP1Q13795 201 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 KIAA0141Q14154 515 aaPredicted RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 NKAPLQ5M9Q1 402 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ZNF468Q5VIY5 522 aaPredicted RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 AADACL3Q5VUY0 350 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 UBAC2Q8NBM4 344 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 PIGTQ969N2 578 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 NABP1Q96AH0 204 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 CLDN23Q96B33 292 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ATG101Q9BSB4 218 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 RTBDNQ9BSG5 229 aaPredicted RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 SLC26A1Q9H2B4 701 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ZNF581Q9P0T4 197 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 HDGFL3Q9Y3E1 203 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 UBE2CO00762 179 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 SOX15O60248 233 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 GSTP1P09211 210 aaKnown RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 CCL4P13236 92 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 PNLIPP16233 465 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 GLRA1P23415 457 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 PSMB6P28072 239 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 RBP2P50120 134 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 F2RL1P55085 397 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 SPCS3P61009 180 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 RPP30P78346 268 aaKnown RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ANKRD55Q3KP44 614 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 RAET1LQ5VY80 246 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 LYSMD4Q5XG99 296 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 FAHD2BQ6P2I3 314 aaPredicted RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 FAM24BQ8N5W8 94 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ZSCAN4Q8NAM6 433 aaPredicted RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 OR51T1Q8NGJ9 327 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 FAHD2AQ96GK7 314 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 SHDQ96IW2 340 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 NUDT16L1Q9BRJ7 211 aaKnown RBP9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 FAM117AQ9C073 453 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ZNF160Q9HCG1 818 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 UQCC1Q9NVA1 299 aa9.12□□□□□ -0.95
CLSTN1-203ENST00000435891 ONECUT2O95948 504 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 CD80P33681 288 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 CSNK1A1P48729 337 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 SLC35A1P78382 337 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 RELQ04864 619 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 TMEM128Q5BJH2 165 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 CDPF1Q6NVV7 123 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 OR5AP2Q8NGF4 316 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 DCUN1D4Q92564 292 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 DUSP23Q9BVJ7 150 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 RBM24Q9BX46 236 aaKnown RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 C19orf25Q9UFG5 118 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 A0A0B4J2A0 478 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 A0A1W2PPH5 198 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 AP4M1O00189 453 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 ZIC3O60481 467 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 SCGNO76038 276 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 IGLV3-1P01715 115 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 HPNP05981 417 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 NTF4P34130 210 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 ZNF239Q16600 458 aaKnown RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 SNAI3Q3KNW1 292 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 VAX1Q5SQQ9 334 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 SLC25A43Q8WUT9 341 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 OR10C1Q96KK4 312 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 OR10A2Q9H208 303 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 ACKR4Q9NPB9 350 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 SHPKQ9UHJ6 478 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 IGHV1-45A0A0A0MS14 117 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 FOXI3A8MTJ6 420 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 KLF7O75840 302 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 AMY2BP19961 511 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 TBPP20226 339 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 MSR1P21757 451 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 BLVRBP30043 206 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 SNU13P55769 128 aaKnown RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 CD300LFQ8TDQ1 290 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 OCSTAMPQ9BR26 566 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 HDHD3Q9BSH5 251 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 OPA3Q9H6K4 179 aa9.11□□□□□ -0.95
CLSTN1-203ENST00000435891 OR5AC2Q9NZP5 309 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms