RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 ELL3Q9HB65 397 aaPredicted RBP6.51□□□□□ -1.37
GARNL3-205ENST00000435213 TAF9BQ9HBM6 251 aa6.51□□□□□ -1.37
GARNL3-205ENST00000435213 YAE1D1Q9NRH1 226 aa6.51□□□□□ -1.37
GARNL3-205ENST00000435213 SLC7A7Q9UM01 511 aa6.51□□□□□ -1.37
GARNL3-205ENST00000435213 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
GARNL3-205ENST00000435213 RHBDD3Q9Y3P4 386 aa6.51□□□□□ -1.37
GARNL3-205ENST00000435213 A0A0A6YYD5 115 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 TLCD2A6NGC4 264 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 C4orf47A7E2U8 309 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 FTCDNL1E5RQL4 147 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 ZGLP1P0C6A0 271 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 PTH2RP49190 550 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 ZNF85Q03923 595 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 ACOT6Q3I5F7 207 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-205ENST00000435213 TCTEX1D4Q5JR98 221 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 ESPNLQ6ZVH7 1005 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 GKN2Q86XP6 184 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 CMTM4Q8IZR5 234 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 CMTM8Q8IZV2 173 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 OR1N2Q8NGR9 330 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 HAVCR1Q96D42 359 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 PRAP1Q96NZ9 151 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 MCHR1Q99705 422 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 OR52D1Q9H346 318 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 IL21RQ9HBE5 538 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 TMEM9BQ9NQ34 198 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 WDR45Q9Y484 360 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 NPIPA5A0A0B4J1W7 369 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 A0A1B0GU03 582 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 NPIPA5E9PKD4 350 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 NPIPA3F8WFD2 350 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 J3QLW9 94 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 RAB27BO00194 218 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 EIF1AYO14602 144 aaKnown RBP6.5□□□□□ -1.37
GARNL3-205ENST00000435213 ALOX12BO75342 701 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 HMGN2P05204 90 aaKnown RBP6.5□□□□□ -1.37
GARNL3-205ENST00000435213 CTSDP07339 412 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-205ENST00000435213 PPIAL4GP0DN37 164 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 ERGP11308 486 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 ST6GAL1P15907 406 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 EN2P19622 333 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-205ENST00000435213 EIF1AXP47813 144 aaKnown RBP6.5□□□□□ -1.37
GARNL3-205ENST00000435213 UCP2P55851 309 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 HMGN2P46Q86SG4 172 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 BATF2Q8N1L9 274 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 TMEM255BQ8WV15 326 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 LINC00615Q96LM1 132 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-205ENST00000435213 VCX2Q9H322 139 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 CMC2Q9NRP2 79 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 ZNF319Q9P2F9 582 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 HCSTQ9UBK5 93 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 NAT8Q9UHE5 227 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 NPIPA1Q9UND3 350 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 WIPI2Q9Y4P8 454 aa6.5□□□□□ -1.37
GARNL3-205ENST00000435213 MDC1Q14676 2089 aaKnown RBP6.5□□□□□ -1.37
GARNL3-205ENST00000435213 TRBV6-7A0A0A0MS04 114 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 RAMP1O60894 148 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 IFNA5P01569 189 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 RAB40ALP0C0E4 278 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 AZU1P20160 251 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 DPP4P27487 766 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 ACVR1BP36896 505 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 SSBP2P81877 361 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-205ENST00000435213 COL10A1Q03692 680 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 PRDX4Q13162 271 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 TCEA2Q15560 299 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 TDRG1Q3Y452 100 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 MIDNQ504T8 468 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 TMEM69Q5SWH9 247 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 C17orf78Q8N4C9 275 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 OR2Z1Q8NG97 314 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 RAB40AQ8WXH6 277 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 KLK6Q92876 244 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 SMIM19Q96E16 107 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 SLC25A21Q9BQT8 299 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-205ENST00000435213 MED20Q9H944 212 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 TMEM242Q9NWH2 141 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 HCFC1R1Q9NWW0 138 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 OR51B2Q9Y5P1 312 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 PRRC2BQ5JSZ5 2229 aaKnown RBP6.49□□□□□ -1.37
GARNL3-205ENST00000435213 PPIAL4EA0A075B759 164 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 PPIAL4CA0A0B4J2A2 164 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 A0A1B0GW64 132 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 ZC3H12DA2A288 527 aaKnown RBP6.49□□□□□ -1.37
GARNL3-205ENST00000435213 NKX2-6A6NCS4 301 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 PPIAL4DF5H284 164 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 CDC42EP2O14613 210 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 PRICKLE3O43900 615 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-205ENST00000435213 NTN1O95631 604 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 THY1P04216 161 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 CTSLP07711 333 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 AKAIN1P0CW23 69 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 PPIAL4FP0DN26 164 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 AKR1C4P17516 323 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 OMGP23515 440 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 TMEM164Q5U3C3 297 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 OR4C11Q6IEV9 310 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 Q6ZN92 141 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 ASB10Q8WXI3 467 aa6.49□□□□□ -1.37
GARNL3-205ENST00000435213 PPP1R14AQ96A00 147 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms