RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 C20orf24Q9BUV8 137 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 PRO3102Q9H379 93 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 METTL8Q9H825 291 aaKnown RBP13.64□□□□□ -0.23
SCARF1-203ENST00000434376 NCOR2Q9Y618 2525 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 AKAP13Q12802 2813 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 SPTBN1Q01082 2364 aaKnown RBP13.64□□□□□ -0.23
SCARF1-203ENST00000434376 ADCYAP1P18509 176 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 GLRA1P23415 457 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 EIF1P41567 113 aaKnown RBP13.64□□□□□ -0.23
SCARF1-203ENST00000434376 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-203ENST00000434376 ZNF84P51523 738 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 P2RY4P51582 365 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 SP6Q3SY56 376 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 AVPI1Q5T686 147 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 ZNF585AQ6P3V2 769 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 C6orf15Q6UXA7 325 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-203ENST00000434376 CARFQ8N187 725 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 PNLDC1Q8NA58 520 aaKnown RBP13.64□□□□□ -0.23
SCARF1-203ENST00000434376 OR6X1Q8NH79 312 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 STOML3Q8TAV4 291 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 ARL11Q969Q4 196 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 PLEKHJ1Q9NW61 149 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 PLCE1Q9P212 2302 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 GTF3C1Q12789 2109 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 CHD8Q9HCK8 2581 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 TRBV23-1A0A0A0MS06 115 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 MAGEA5P43359 124 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 TSPO2Q5TGU0 170 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 ABHD17BQ5VST6 288 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 C5orf46Q6UWT4 87 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 MOB3CQ70IA8 216 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 KCNRGQ8N5I3 272 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 RAB22AQ9UL26 194 aa13.64□□□□□ -0.23
SCARF1-203ENST00000434376 NXPH3O95157 252 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 SERPINA5P05154 406 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 NME2P22392 152 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 ACKR3P25106 362 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 CALCRP30988 508 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 PCK2Q16822 640 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 KRBOX4Q5JUW0 171 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 SLC25A47Q6Q0C1 308 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 OR5AS1Q8N127 324 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 GJC3Q8NFK1 279 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 OR5M8Q8NGP6 311 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 SFT2D1Q8WV19 159 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 FOXRED1Q96CU9 486 aaPredicted RBP13.63□□□□□ -0.23
SCARF1-203ENST00000434376 LYZL4Q96KX0 146 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 CMTM3Q96MX0 182 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 FAAP24Q9BTP7 215 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 ZMAT5Q9UDW3 170 aaKnown RBP13.63□□□□□ -0.23
SCARF1-203ENST00000434376 HDGFL3Q9Y3E1 203 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 ZNF17P17021 662 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 DSCR4P56555 118 aaPredicted RBP13.63□□□□□ -0.23
SCARF1-203ENST00000434376 SPEM2Q0P670 501 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 MICBQ29980 383 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 TNFSF18Q9UNG2 199 aa13.63□□□□□ -0.23
SCARF1-203ENST00000434376 RNF222A6NCQ9 220 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 CD1AP06126 327 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 IGFBP3P17936 291 aaPredicted RBP13.62□□□□□ -0.23
SCARF1-203ENST00000434376 PPT1P50897 306 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 SUMO3P55854 103 aaPredicted RBP13.62□□□□□ -0.23
SCARF1-203ENST00000434376 PMP22Q01453 160 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 EXT1Q16394 746 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 FAM209BQ5JX69 171 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 C14orf79Q96F83 325 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 PIGQQ9BRB3 760 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 SMIM3Q9BZL3 60 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 LPAR5Q9H1C0 372 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 EIF3GO75821 320 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCARF1-203ENST00000434376 CBR3O75828 277 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 OR2F2O95006 317 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 TMEM50BP56557 158 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 ZP4Q12836 540 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 OR2F1Q13607 317 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 GCNT2Q8N0V5 402 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 PHB2Q99623 299 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 LUZP4Q9P127 313 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 CDC14BO60729 498 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 SRSF10O75494 262 aaKnown RBP13.62□□□□□ -0.23
SCARF1-203ENST00000434376 CSRP1P21291 193 aaKnown RBP13.62□□□□□ -0.23
SCARF1-203ENST00000434376 SERPINF1P36955 418 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 HGFACQ04756 655 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 RSU1Q15404 277 aa13.62□□□□□ -0.23
SCARF1-203ENST00000434376 NAA11Q9BSU3 229 aaPredicted RBP13.62□□□□□ -0.23
SCARF1-203ENST00000434376 ARGFXA6NJG6 315 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 TNFSF15O95150 251 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 MLF1P58340 268 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 PEA15Q15121 130 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 PIGYQ3MUY2 71 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 ZNF260Q3ZCT1 412 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 EIF4E3Q8N5X7 224 aaKnown RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 OR5H2Q8NGV7 314 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 NELFAQ9H3P2 528 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 NXT1Q9UKK6 140 aaKnown RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 HEATR1Q9H583 2144 aaKnown RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 SMG1Q96Q15 3661 aaKnown RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 MED19A0JLT2 244 aaPredicted RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 SNAPC5O75971 98 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 OR7C1O76099 320 aaPredicted RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 SNAPINO95295 136 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms