RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TUBAL3A6NHL2 446 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 CEACAM18A8MTB9 384 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 NOS1APO75052 506 aaPredicted RBP11.14□□□□□ -0.63
DDX56-204ENST00000431640 SIX6O95475 246 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 HLA-AP01891 365 aaKnown RBP11.14□□□□□ -0.63
DDX56-204ENST00000431640 AMY2BP19961 511 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 ACKR3P25106 362 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 SSTR2P30874 369 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 RAB14P61106 215 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 HGFACQ04756 655 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 OR8B8Q15620 311 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 MICBQ29980 383 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 C2orf68Q2NKX9 166 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 NSUN5P2Q63ZY6 315 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 IGFL2Q6UWQ7 119 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 COLCA1Q6ZS62 124 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 PXT1Q8NFP0 134 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 FGFBP3Q8TAT2 258 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 MITD1Q8WV92 249 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 ST8SIA4Q92187 359 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 FBXW5Q969U6 566 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 ELMOD3Q96FG2 381 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 LDAHQ9H6V9 325 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 PLEKHJ1Q9NW61 149 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 KCNN3Q9UGI6 736 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 HSF4Q9ULV5 492 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 EDARQ9UNE0 448 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 NOP16Q9Y3C1 178 aaKnown RBP11.14□□□□□ -0.63
DDX56-204ENST00000431640 DSPP15924 2871 aaKnown RBP11.14□□□□□ -0.63
DDX56-204ENST00000431640 URB1O60287 2271 aaKnown RBP11.13□□□□□ -0.63
DDX56-204ENST00000431640 hCG_38984A0A1B0GV85 526 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 FAM230AA0A1W2PPH8 454 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 RFPL4AA6NLU0 287 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 RFPL4AL1F8VTS6 287 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 RRP8O43159 456 aaKnown RBP11.13□□□□□ -0.63
DDX56-204ENST00000431640 RAD51DO75771 328 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 DUS4LO95620 317 aaKnown RBP11.13□□□□□ -0.63
DDX56-204ENST00000431640 CD8AP01732 235 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 S100A11P31949 105 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 ECI1P42126 302 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 ARG2P78540 354 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.13□□□□□ -0.63
DDX56-204ENST00000431640 OR8H3Q8N146 312 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 TMEM185AQ8NFB2 350 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 OR5M8Q8NGP6 311 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 Q96M66 194 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 ST6GALNAC5Q9BVH7 336 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 IL36GQ9NZH8 169 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 COMMD9Q9P000 198 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 GPR132Q9UNW8 380 aa11.13□□□□□ -0.63
DDX56-204ENST00000431640 LINC00862A6NCI5 91 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 OR2AT4A6NND4 320 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 HTR3BO95264 441 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 SERPINA5P05154 406 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 CXCL2P19875 107 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 SNU13P55769 128 aaKnown RBP11.12□□□□□ -0.63
DDX56-204ENST00000431640 ZNF92Q03936 586 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 PLP2Q04941 152 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 MALLQ13021 153 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 TBR1Q16650 682 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 TMEM128Q5BJH2 165 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 ZNF766Q5HY98 468 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 TMEM65Q6PI78 240 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 MOB3CQ70IA8 216 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
DDX56-204ENST00000431640 CSNK2A3Q8NEV1 391 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 OR5AP2Q8NGF4 316 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 OR10K1Q8NGX5 313 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 FNDC9Q8TBE3 224 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 EXTL1Q92935 676 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 MRGPRFQ96AM1 343 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 CACNA1GO43497 2377 aa11.12□□□□□ -0.63
DDX56-204ENST00000431640 TRGV5A0A0B4J1U4 118 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 A0A0B4J2A0 478 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 PRSS44E7EML9 344 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 MPC2O95563 127 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 IGHV3-9P01782 118 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 RPA2P15927 270 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 PPP3CBP16298 524 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 AKR1C4P17516 323 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 FPR2P25090 351 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 TMPRSS3P57727 454 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 CYCSP99999 105 aaKnown RBP11.11□□□□□ -0.63
DDX56-204ENST00000431640 PPP1R1AQ13522 171 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 EXOSC2Q13868 293 aaKnown RBP11.11□□□□□ -0.63
DDX56-204ENST00000431640 SURF2Q15527 256 aaPredicted RBP11.11□□□□□ -0.63
DDX56-204ENST00000431640 CHRFAM7AQ494W8 412 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 CLLU1Q5K131 121 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 LY6G6FQ5SQ64 297 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 DCAF12L2Q5VW00 463 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 C3P1Q6ZMU1 363 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 ZSCAN4Q8NAM6 433 aaPredicted RBP11.11□□□□□ -0.63
DDX56-204ENST00000431640 MARCH1Q8TCQ1 289 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 PIGCQ92535 297 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 APOBEC3DQ96AK3 386 aaPredicted RBP11.11□□□□□ -0.63
DDX56-204ENST00000431640 PDCD10Q9BUL8 212 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 PPA2Q9H2U2 334 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 OPA3Q9H6K4 179 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms