RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 LRRC42Q9Y546 428 aa16.79■□□□□ 0.28
CSNK1E-207ENST00000430335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.78■□□□□ 0.281e-6■■■■□ 19.5
CSNK1E-207ENST00000430335 AKR7A2O43488 359 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 SULT1B1O43704 296 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 PGA5P0DJD9 388 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 ZNF16P17020 682 aaPredicted RBP16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 MAP2K4P45985 399 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 ASPHD2Q6ICH7 369 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 ANGPTL5Q86XS5 388 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 FAM90A1Q86YD7 464 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 POC1AQ8NBT0 407 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 OR13C5Q8NGS8 318 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 THRSPQ92748 146 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 NEIL1Q96FI4 390 aaPredicted RBP16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 RASL12Q9NYN1 266 aa16.78■□□□□ 0.28
CSNK1E-207ENST00000430335 SYNGR1O43759 233 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 TGFAP01135 160 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 MSMBP08118 114 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 OCMP0CE72 109 aaPredicted RBP16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 RPS2P15880 293 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 GLRA1P23415 457 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 MTCP1P56278 107 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 MLLT11Q13015 90 aaPredicted RBP16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 TPBGQ13641 420 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 FAM166AQ6J272 317 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 SVOPQ8N4V2 548 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 MS4A15Q8N5U1 240 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 OR51F2Q8NH61 342 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 UFD1Q92890 307 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 WDR13Q9H1Z4 485 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 ACOT13Q9NPJ3 140 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 LRCH1Q9Y2L9 728 aa16.77■□□□□ 0.28
CSNK1E-207ENST00000430335 HIVEP2P31629 2446 aa16.77■□□□□ 0.27
CSNK1E-207ENST00000430335 ABCA2Q9BZC7 2435 aa16.77■□□□□ 0.27
CSNK1E-207ENST00000430335 TRBV5-7A0A0A0MS05 114 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 A8MXK9 166 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 FOXH1O75593 365 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 GPX5O75715 221 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 RAB3AP20336 220 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 DVL1P1P54792 670 aaPredicted RBP16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 LYPD2Q6UXB3 125 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 NLRC3Q7RTR2 1065 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 ZNF367Q7RTV3 350 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 OR8B3Q8NGG8 313 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 OR8B2Q96RD0 313 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 MGLLQ99685 303 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 NRIP2Q9BQI9 281 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 DNTTIP1Q9H147 329 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 TAS2R4Q9NYW5 299 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 KAAG1Q9UBP8 84 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 DNAJB11Q9UBS4 358 aa16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 POLR3KQ9Y2Y1 108 aaPredicted RBP16.76■□□□□ 0.27
CSNK1E-207ENST00000430335 IGHV3OR15-7A0A075B7D8 119 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 TRAV20A0A0B4J274 112 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 A8MV72 311 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 ZNF879B4DU55 563 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 GYPAP02724 150 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 HSMCR30P0CW71 290 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 ERVK11-1P61568 191 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 EMX1Q04741 257 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 KCTD21Q4G0X4 260 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 ESCO2Q56NI9 601 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 ATPAF1Q5TC12 328 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 STUMQ69YW2 141 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 Q71RC1 249 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 TMIGD2Q96BF3 282 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 SEH1LQ96EE3 360 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 OR14A2Q96R54 314 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 HES4Q9HCC6 221 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 YAE1D1Q9NRH1 226 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 TMEM160Q9NX00 188 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 NLKQ9UBE8 527 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 KCNS2Q9ULS6 477 aa16.75■□□□□ 0.27
CSNK1E-207ENST00000430335 ADAM20O43506 726 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 ALDOBP05062 364 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 HCKP08631 526 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 CPEP16870 476 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 IGFBP3P17936 291 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 FSTP19883 344 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 MAPK3P27361 379 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 GMFBP60983 142 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 SEC61A1P61619 476 aaKnown RBP16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 PPP3R1P63098 170 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 SMIM21Q3B7S5 101 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 LIPKQ5VXJ0 399 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 CRIP3Q6Q6R5 217 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 ZNF841Q6ZN19 808 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 ACP7Q6ZNF0 438 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 SLC25A26Q70HW3 274 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 GLCCI1Q86VQ1 547 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 MKXQ8IYA7 352 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 SPARTQ8N0X7 666 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 OR51A2Q8NGJ7 313 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 TMEM186Q96B77 213 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 CPNE2Q96FN4 548 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 ZNF488Q96MN9 340 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 DERL3Q96Q80 235 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 SSBP3Q9BWW4 388 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 LPAR2Q9HBW0 351 aa16.74■□□□□ 0.27
CSNK1E-207ENST00000430335 MTCH1Q9NZJ7 389 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms