RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MICU1Q9BPX6 476 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF69Q9UC07 566 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 IGHV3OR16-10A0A075B7F0 116 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 A0A0A6YYJ9 748 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 ANKRD61A6NGH8 418 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 ANXA2P2A6NMY6 339 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 FCN3O75636 299 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 CD1AP06126 327 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 GRPP07492 148 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 RPS2P15880 293 aaKnown RBP14.1□□□□□ -0.15
UBE3D-204ENST00000430071 SOX2P48431 317 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 UBE2V2Q15819 145 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 CEACAM21Q3KPI0 293 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 ESCO2Q56NI9 601 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 SFRP4Q6FHJ7 346 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-204ENST00000430071 MUC20Q8N307 709 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-204ENST00000430071 ZDHHC22Q8N966 263 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 BOLLQ8N9W6 283 aaKnown RBP14.1□□□□□ -0.15
UBE3D-204ENST00000430071 GPR148Q8TDV2 347 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF418Q8TF45 676 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-204ENST00000430071 TSEN15Q8WW01 171 aaKnown RBP14.1□□□□□ -0.15
UBE3D-204ENST00000430071 DACT3Q96B18 629 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-204ENST00000430071 C10orf35Q96D05 121 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 OPALINQ96PE5 141 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 RTL8AQ9BWD3 113 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 SSBP3Q9BWW4 388 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-204ENST00000430071 CHST5Q9GZS9 411 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 ABCB9Q9NP78 766 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 C14orf119Q9NWQ9 140 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 PPIAL4AQ9Y536 164 aa14.1□□□□□ -0.15
UBE3D-204ENST00000430071 IFNL4K9M1U5 179 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 RPSAP08865 295 aaKnown RBP14.09□□□□□ -0.15
UBE3D-204ENST00000430071 HSMCR30P0CW71 290 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF20P17024 532 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 GPM6AP51674 278 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 PAX8Q06710 450 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 TUSC1Q2TAM9 212 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF841Q6ZN19 808 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF367Q7RTV3 350 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 C11orf53Q8IXP5 236 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 SVOPQ8N4V2 548 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 Q8TCH9 128 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 PP6455Q8WZ26 134 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 RNF170Q96K19 258 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF48Q96MX3 618 aaPredicted RBP14.09□□□□□ -0.15
UBE3D-204ENST00000430071 HIST1H2AAQ96QV6 131 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 MGLLQ99685 303 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 ISYNA1Q9NPH2 558 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 CTSZQ9UBR2 303 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 DHDHQ9UQ10 334 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 AUP1Q9Y679 476 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 IGKV1-9A0A0C4DH69 117 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 TRBV5-5A0A0J9YX44 114 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF732B4DXR9 585 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 TNFAIP8O95379 198 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 IGHV4-38-2P0DP08 117 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 MLLT11Q13015 90 aaPredicted RBP14.09□□□□□ -0.15
UBE3D-204ENST00000430071 TPBGQ13641 420 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 YIF1BQ5BJH7 314 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 FAM76BQ5HYJ3 339 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 LIPKQ5VXJ0 399 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 ASPHD2Q6ICH7 369 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 UTS2BQ765I0 119 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 PARP16Q8N5Y8 322 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 SIGLECL1Q8N7X8 197 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 OR1M1Q8NGA1 313 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 OR5A2Q8NGI9 324 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 NPRL2Q8WTW4 380 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 NEIL1Q96FI4 390 aaPredicted RBP14.09□□□□□ -0.15
UBE3D-204ENST00000430071 DUX5Q96PT3 197 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 MIOXQ9UGB7 285 aa14.09□□□□□ -0.15
UBE3D-204ENST00000430071 PQLC2LA1A4F0 135 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 OR5B21A6NL26 309 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 LRRC30A6NM36 301 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 TNFRSF13BO14836 293 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-204ENST00000430071 OCM2P0CE71 109 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 EGR1P18146 543 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 GNB2P62879 340 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 GNG3P63215 75 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 MZT1Q08AG7 82 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 UBE2UQ5VVX9 321 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 WDR25Q64LD2 544 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-204ENST00000430071 KCTD8Q6ZWB6 473 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 USP43Q70EL4 1123 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 FGFRL1Q8N441 504 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 BPIFB2Q8N4F0 458 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 UFD1Q92890 307 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 RPL3LQ92901 407 aaKnown RBP14.08□□□□□ -0.16
UBE3D-204ENST00000430071 ERGIC1Q969X5 290 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 ORAI1Q96D31 301 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 C1orf147Q96MC9 270 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-204ENST00000430071 TLNRD1Q9H1K6 362 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 ZNF696Q9H7X3 374 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 FN3KRPQ9HA64 309 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 C1orf123Q9NWV4 160 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 RNF7Q9UBF6 113 aa14.08□□□□□ -0.16
UBE3D-204ENST00000430071 IGHV2-70DA0A0C4DH43 119 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 A6NLC8 198 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 TMEM210A6NLX4 147 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 C22orf46C9J442 243 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms