RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OR2M2Q96R28 347 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 ARV1Q9H2C2 271 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 ETV7Q9Y603 341 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 V9GYS6 101 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 GPM6AP51674 278 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 FLI1Q01543 452 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-207ENST00000429896 OR51D1Q8NGF3 324 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 ZNF436Q9C0F3 470 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-207ENST00000429896 CABIN1Q9Y6J0 2220 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 ABCD4O14678 606 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 CRHP06850 196 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 FAHP16930 419 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 TNFAIP6P98066 277 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-207ENST00000429896 MPPED2Q15777 294 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 THNSL2Q86YJ6 484 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 OR56B4Q8NH76 319 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 DYNC2LI1Q8TCX1 351 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 NAP1L6A6NFF2 107 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 UPK3AO75631 287 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 EPPINO95925 133 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 CLEC12BQ2HXU8 276 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 SMIM21Q3B7S5 101 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 SEC22CQ9BRL7 303 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 SPACA1Q9HBV2 294 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 ADGRL4Q9HBW9 690 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 SCN3AQ9NY46 2000 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 C19orf57Q0VDD7 668 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 TMEM182Q6ZP80 229 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-207ENST00000429896 OR1S2Q8NGQ3 325 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 MDP1Q86V88 176 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 CLCF1Q9UBD9 225 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 OXA1LQ15070 435 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 SLC25A35Q3KQZ1 300 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PSD2Q9BQI7 771 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 BARX1Q9HBU1 254 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-207ENST00000429896 CA6P23280 308 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 H2BFWTQ7Z2G1 175 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 FYTTD1Q96QD9 318 aaKnown RBP11.37□□□□□ -0.59
PTCH1-207ENST00000429896 TAS2R5Q9NYW4 299 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 TINAGQ9UJW2 476 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 EXOGQ9Y2C4 368 aaKnown RBP11.37□□□□□ -0.59
PTCH1-207ENST00000429896 A0A1W2PNV4 684 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 SULT1C2O00338 296 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
PTCH1-207ENST00000429896 RGS11O94810 467 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 ACSM1Q08AH1 577 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 RPL7L1Q6DKI1 246 aaKnown RBP11.37□□□□□ -0.59
PTCH1-207ENST00000429896 DBX2Q6ZNG2 339 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 CATSPERDQ86XM0 798 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PP6455Q8WZ26 134 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 ELOVL5Q9NYP7 299 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PRSS44E7EML9 344 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 TERTO14746 1132 aaKnown RBP11.37□□□□□ -0.59
PTCH1-207ENST00000429896 CYTIPO60759 359 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PTP4A3O75365 173 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 IAPPP10997 89 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PPP3CBP16298 524 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PLXDC2Q6UX71 529 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 C20orf196Q8IYI0 205 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 OR10J5Q8NHC4 309 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PTP4A1Q93096 173 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 ARPC5LQ9BPX5 153 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 CLEC5AQ9NY25 188 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 PRSS50Q9UI38 385 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 GAB2Q9UQC2 676 aa11.37□□□□□ -0.59
PTCH1-207ENST00000429896 MRPS18CQ9Y3D5 142 aaKnown RBP11.37□□□□□ -0.59
PTCH1-207ENST00000429896 URB1O60287 2271 aaKnown RBP11.36□□□□□ -0.59
PTCH1-207ENST00000429896 THBS3P49746 956 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 SIAH3Q8IW03 269 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 CELF2-AS1Q8N7Q2 184 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 FADS6Q8N9I5 356 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 RNF167Q9H6Y7 350 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 C1QTNF9BB2RNN3 333 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 C1QTNF9P0C862 333 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 RPS27AP62979 156 aaKnown RBP11.36□□□□□ -0.59
PTCH1-207ENST00000429896 UBA52P62987 128 aaKnown RBP11.36□□□□□ -0.59
PTCH1-207ENST00000429896 XAF1Q6GPH4 301 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 FOXD3Q9UJU5 478 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-207ENST00000429896 OR5H14A6NHG9 310 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 OR5H1A6NKK0 313 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 SEC14L6B5MCN3 397 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 NFYAP23511 347 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-207ENST00000429896 PCK2Q16822 640 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 OR2AE1Q8NHA4 323 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 AKIP1Q9NQ31 210 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 NDUFB11Q9NX14 153 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 PRSS23O95084 383 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 ZNF385CQ66K41 422 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-207ENST00000429896 FAAP20Q6NZ36 180 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 MESP1Q9BRJ9 268 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 NECAP2Q9NVZ3 263 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 SLC23A1Q9UHI7 598 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 GCM2O75603 506 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-207ENST00000429896 DHRS3O75911 302 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 OR8U1Q8NH10 309 aa11.36□□□□□ -0.59
PTCH1-207ENST00000429896 HELZP42694 1942 aaKnown RBP11.36□□□□□ -0.59
PTCH1-207ENST00000429896 TCAPO15273 167 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 TAGLN2P37802 199 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms