RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SIGIRRQ6IA17 410 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 SLC25A26Q70HW3 274 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 FAM214BQ7L5A3 538 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 FBXL14Q8N1E6 418 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 ZADH2Q8N4Q0 377 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 ST8SIA4Q92187 359 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 COL25A1Q9BXS0 654 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-210ENST00000428307 SLA2Q9H6Q3 261 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 SLC2A8Q9NY64 477 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 CLCF1Q9UBD9 225 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 RP1L1Q8IWN7 2480 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-210ENST00000428307 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 CEACAM4O75871 244 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 SLC22A5O76082 557 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 HLA-AP01891 365 aaKnown RBP8.98□□□□□ -0.97
HDAC9-210ENST00000428307 AKR1C4P17516 323 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 WNT5AP41221 380 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 OR3A3P47888 321 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 NPY4RP50391 375 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 GPM6AP51674 278 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 PRDX4Q13162 271 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 DHRS2Q13268 280 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 LGALSLQ3ZCW2 172 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-210ENST00000428307 SPATA46Q5T0L3 261 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 ADAD2Q8NCV1 583 aaKnown RBP8.98□□□□□ -0.97
HDAC9-210ENST00000428307 CSNK2A3Q8NEV1 391 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 MARCH1Q8TCQ1 289 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 WBP1Q96G27 269 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 C1QTNF6Q9BXI9 259 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 GON7Q9BXV9 100 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 FN3KRPQ9HA64 309 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 GP6Q9HCN6 339 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 LUZP4Q9P127 313 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 SLC23A1Q9UHI7 598 aa8.98□□□□□ -0.97
HDAC9-210ENST00000428307 SERPINE3A8MV23 424 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 SS18L1O75177 396 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-210ENST00000428307 OR2A4O95047 310 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 TPOP07202 933 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 CELA3BP08861 270 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 GIPP09681 153 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF35P13682 527 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 TBPP20226 339 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 IGHV1-2P23083 117 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 NPBWR2P48146 333 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF81P51508 661 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 LIN54Q6MZP7 749 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF585AQ6P3V2 769 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 TFAP2EQ6VUC0 442 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 MYPOPQ86VE0 399 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-210ENST00000428307 OSR2Q8N2R0 312 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 FTMTQ8N4E7 242 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 C12orf45Q8N5I9 185 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF611Q8N823 705 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 C9orf106Q8NAJ2 232 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 SLC30A7Q8NEW0 376 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 OR5H2Q8NGV7 314 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 TERB2Q8NHR7 220 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 OR2A7Q96R45 310 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 ST3GAL6Q9Y274 331 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 ATMQ13315 3056 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 IGKV1D-8A0A087WSZ0 117 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 FAM221AA4D161 298 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 K7EM74 188 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 AQP7O14520 342 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 LILRA1O75019 489 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 NOS1APO75052 506 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-210ENST00000428307 NAT1P18440 290 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 PI3P19957 117 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 VAMP1P23763 118 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 HAAOP46952 286 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 TGFBR3Q03167 851 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 FOXF2Q12947 444 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 BAMBIQ13145 260 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 PPP1R1AQ13522 171 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 ZNF169Q14929 603 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-210ENST00000428307 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
HDAC9-210ENST00000428307 VWA1Q6PCB0 445 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 RFPL4BQ6ZWI9 263 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 HOGA1Q86XE5 327 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 CASTOR1Q8WTX7 329 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 NANOS1Q8WY41 292 aaKnown RBP8.97□□□□□ -0.97
HDAC9-210ENST00000428307 DYRK2Q92630 601 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 SARAFQ96BY9 339 aa8.97□□□□□ -0.97
HDAC9-210ENST00000428307 APC2O95996 2303 aa8.96□□□□□ -0.97
HDAC9-210ENST00000428307 MED12LQ86YW9 2145 aa8.96□□□□□ -0.97
HDAC9-210ENST00000428307 FIGNL2A6NMB9 653 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 CD300LBA8K4G0 201 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 PDGFAP04085 211 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 OPRM1P35372 400 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 CBX5P45973 191 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 IDH3GP51553 393 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-210ENST00000428307 UBE2NP61088 152 aaKnown RBP8.96□□□□□ -0.98
HDAC9-210ENST00000428307 RAP2BP61225 183 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 IL13RA1P78552 427 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 CHRFAM7AQ494W8 412 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 ASCL4Q6XD76 172 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 SLC25A42Q86VD7 318 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 OR10AD1Q8NGE0 317 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 HPSE2Q8WWQ2 592 aa8.96□□□□□ -0.98
HDAC9-210ENST00000428307 CCDC120Q96HB5 630 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms