RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ESM1Q9NQ30 184 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 ERVK13-1Q9NX77 482 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 NLKQ9UBE8 527 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 NKX1-2Q9UD57 310 aaPredicted RBP11.28□□□□□ -0.6
SNX3-204ENST00000426155 ANK2Q01484 3957 aa11.27□□□□□ -0.6
SNX3-204ENST00000426155 IGKV1D-17A0A075B6S4 117 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 IGKV1-27A0A075B6S5 117 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 OR2AT4A6NND4 320 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 DHRS7CA6NNS2 312 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 E9PI62 339 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 J3QT63 122 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 PLATP00750 562 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 CEBPDP49716 269 aaPredicted RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 ACTA2P62736 377 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 ACTG2P63267 376 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 ADARB1P78563 741 aaKnown RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 PRB3Q04118 309 aaPredicted RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 RAB40BQ12829 278 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 DYNC1I2Q13409 638 aaKnown RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 GALEQ14376 348 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 OGFRL1Q5TC84 451 aaPredicted RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 ZNF418Q8TF45 676 aaPredicted RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 UPRTQ96BW1 309 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 C12orf43Q96C57 262 aaKnown RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 ADAT3Q96EY9 351 aaPredicted RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 ZNF48Q96MX3 618 aaPredicted RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 ADI1Q9BV57 179 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 ZNF222Q9UK12 451 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 NUP50Q9UKX7 468 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 RPL36Q9Y3U8 105 aaKnown RBP11.27□□□□□ -0.61
SNX3-204ENST00000426155 PCDHGB1Q9Y5G3 927 aa11.27□□□□□ -0.61
SNX3-204ENST00000426155 MDFIC2A0A1B0GVS7 189 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 NKX6-3A6NJ46 265 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 OR4C45A6NMZ5 311 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 CASQ2O14958 399 aaPredicted RBP11.26□□□□□ -0.61
SNX3-204ENST00000426155 INMTO95050 263 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 FADS2O95864 444 aaKnown RBP11.26□□□□□ -0.61
SNX3-204ENST00000426155 GNAO1P09471 354 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 LIMS3P0CW19 117 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 LIMS4P0CW20 117 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 PGA5P0DJD9 388 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 PSG2P11465 335 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 MMP9P14780 707 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 GABRA2P47869 451 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 TGM4P49221 684 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 DLX1P56177 255 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 HILS1P60008 231 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 CD276Q5ZPR3 534 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 RUSC1-AS1Q66K80 236 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 SLC36A1Q7Z2H8 476 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 KCTD20Q7Z5Y7 419 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 PACRGLQ8N7B6 248 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 SIGLECL1Q8N7X8 197 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 POC1AQ8NBT0 407 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 ITFG2Q969R8 447 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 TMIGD2Q96BF3 282 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 TBX15Q96SF7 602 aa11.26□□□□□ -0.61
SNX3-204ENST00000426155 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
SNX3-204ENST00000426155 IGKV1-9A0A0C4DH69 117 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ZNF879B4DU55 563 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 F8VVB4 439 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 F8VWA3 439 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 NDUFB3O43676 98 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ETV1P50549 477 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ARF6P62330 175 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 SCGB2A2Q13296 93 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ALKBH1Q13686 389 aaKnown RBP11.25□□□□□ -0.61
SNX3-204ENST00000426155 ATPAF1Q5TC12 328 aaPredicted RBP11.25□□□□□ -0.61
SNX3-204ENST00000426155 TMEM244Q5VVB8 128 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 XAF1Q6GPH4 301 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ACP7Q6ZNF0 438 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 RNF144BQ7Z419 303 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ZNF573Q86YE8 665 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 SYS1Q8N2H4 156 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 DHRSXQ8N5I4 330 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ZDHHC22Q8N966 263 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ZNRF1Q8ND25 227 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 ZNF671Q8TAW3 534 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 H1FXQ92522 213 aaKnown RBP11.25□□□□□ -0.61
SNX3-204ENST00000426155 FGGYQ96C11 551 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 NRIP2Q9BQI9 281 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 SUCNR1Q9BXA5 334 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 SIRPDQ9H106 197 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 MRPS18AQ9NVS2 196 aaKnown RBP11.25□□□□□ -0.61
SNX3-204ENST00000426155 MAB21L2Q9Y586 359 aa11.25□□□□□ -0.61
SNX3-204ENST00000426155 TENM1Q9UKZ4 2725 aa11.24□□□□□ -0.61
SNX3-204ENST00000426155 DPPA5A6NC42 116 aa11.24□□□□□ -0.61
SNX3-204ENST00000426155 SIGLEC5O15389 551 aa11.24□□□□□ -0.61
SNX3-204ENST00000426155 GATBO75879 557 aaKnown RBP11.24□□□□□ -0.61
SNX3-204ENST00000426155 TOX4O94842 621 aa11.24□□□□□ -0.61
SNX3-204ENST00000426155 ISG15P05161 165 aa11.24□□□□□ -0.61
SNX3-204ENST00000426155 ACAA1P09110 424 aaPredicted RBP11.24□□□□□ -0.61
SNX3-204ENST00000426155 PPIAL4GP0DN37 164 aa11.24□□□□□ -0.61
SNX3-204ENST00000426155 ZNF20P17024 532 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms