RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 DUX4L5P0CJ88 424 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 DUX4L6P0CJ89 424 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 DUX4L7P0CJ90 424 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 NR2C1P13056 603 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 CCL1P22362 96 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 RPL35P42766 123 aaKnown RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 SNU13P55769 128 aaKnown RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 TAS2R31P59538 309 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 FLI1Q01543 452 aaPredicted RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 SRSF4Q08170 494 aaKnown RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 ZNF345Q14585 488 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 UBE2V2Q15819 145 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 ABHD17BQ5VST6 288 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 FAHD2BQ6P2I3 314 aaPredicted RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 OVCH2Q7RTZ1 564 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 FAHD2AQ96GK7 314 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 NUDT16L1Q9BRJ7 211 aaKnown RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 ZNF701Q9NV72 531 aaPredicted RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 RASL12Q9NYN1 266 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 TAS2R3Q9NYW6 316 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 EHFQ9NZC4 300 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 DUX4Q9UBX2 424 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 APC2O95996 2303 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 A0A087WZY1 265 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 MFNGO00587 321 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 DHHO43323 396 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 ZIC3O60481 467 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 PGAM2P15259 253 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 WT1P19544 449 aaPredicted RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 GABRR1P24046 479 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 PSMB6P28072 239 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 CYB561P49447 251 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 LSM6P62312 80 aaKnown RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 ECH1Q13011 328 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 HSD17B13Q7Z5P4 300 aaPredicted RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 ADAMTS17Q8TE56 1095 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 LRFN1Q9P244 771 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 PIEZO2Q9H5I5 2752 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 M0R135 149 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 DHRS3O75911 302 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 HPNP05981 417 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 CRHP06850 196 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 FKBP2P26885 142 aaKnown RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 AKR1D1P51857 326 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 DSCR4P56555 118 aaPredicted RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 H3F3AP84243 136 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 ACTBL2Q562R1 376 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 TMEM128Q5BJH2 165 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 CLEC18BQ6UXF7 455 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 YRDCQ86U90 279 aaKnown RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 OR2AE1Q8NHA4 323 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 TMEM230Q96A57 120 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 MRPS24Q96EL2 167 aaKnown RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 ZNF799Q96GE5 643 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 NAA11Q9BSU3 229 aaPredicted RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 HES7Q9BYE0 225 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 DSPP15924 2871 aaKnown RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 ANKRD11Q6UB99 2663 aaPredicted RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 A0A0J9YW62 118 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 LOC102725191A0A1B0GVB3 256 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 MPTX1A8MV57 137 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 EIF1BO60739 113 aaKnown RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 KNG1P01042 644 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 P04436 131 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 HLA-GP17693 338 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 SNTB1Q13884 538 aaKnown RBP9.32□□□□□ -0.92
CUX1-205ENST00000425244 PNLIPRP3Q17RR3 467 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 SNAI3Q3KNW1 292 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 CHRFAM7AQ494W8 412 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 VAX1Q5SQQ9 334 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 ARRDC1Q8N5I2 433 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 TMEM185AQ8NFB2 350 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 OR13G1Q8NGZ3 307 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 NABP1Q96AH0 204 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 ANGPTL4Q9BY76 406 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 SRXN1Q9BYN0 137 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 SHARPINQ9H0F6 387 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 PROK2Q9HC23 129 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 GPR173Q9NS66 373 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 COA4Q9NYJ1 87 aa9.32□□□□□ -0.92
CUX1-205ENST00000425244 A0A0B4J2A0 478 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 RAB19A4D1S5 217 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 PRSS47A8MTI9 375 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 GATCO43716 136 aaKnown RBP9.31□□□□□ -0.92
CUX1-205ENST00000425244 TMEM225BP0DP42 221 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 GLRA1P23415 457 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 ZNF84P51523 738 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 CCL11P51671 97 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 DEFA5Q01523 94 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 ZNF239Q16600 458 aaKnown RBP9.31□□□□□ -0.92
CUX1-205ENST00000425244 TMEM17Q86X19 198 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 TMEM123Q8N131 208 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 BHLHE23Q8NDY6 225 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 TMEM54Q969K7 222 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 FBXO17Q96EF6 278 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 SIGLEC12Q96PQ1 595 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 METTL8Q9H825 291 aaKnown RBP9.31□□□□□ -0.92
CUX1-205ENST00000425244 ASF1BQ9NVP2 202 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 GSKIPQ9P0R6 139 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 SHPKQ9UHJ6 478 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms