RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 OR10C1Q96KK4 312 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 FZR1Q9UM11 496 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 AKAP6Q13023 2319 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 SIGIRRQ6IA17 410 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 CLEC18BQ6UXF7 455 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 NEK7Q8TDX7 302 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 SLAMF9Q96A28 289 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 TMEM230Q96A57 120 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 URM1Q9BTM9 101 aaKnown RBP10.36□□□□□ -0.75
PTPRN-204ENST00000423636 TMEM231Q9H6L2 316 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 PTTG3PQ9NZH4 202 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 UPB1Q9UBR1 384 aa10.36□□□□□ -0.75
PTPRN-204ENST00000423636 NRASP01111 189 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 ZBTB25P24278 435 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 ARPC4P59998 168 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 AANATQ16613 207 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 FAM209AQ5JX71 171 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 ZNF660Q6AZW8 331 aaPredicted RBP10.35□□□□□ -0.75
PTPRN-204ENST00000423636 LYG2Q86SG7 212 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 OR56B2PQ8NGI1 322 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 OR6S1Q8NH40 331 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 CCDC107Q8WV48 283 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 ZC4H2Q9NQZ6 224 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 OR5AC2Q9NZP5 309 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 AK3Q9UIJ7 227 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 NCOR2Q9Y618 2525 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 AGPAT2O15120 278 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 SYNGR3O43761 229 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 PPIAP62937 165 aaKnown RBP10.35□□□□□ -0.75
PTPRN-204ENST00000423636 SCRN3Q0VDG4 424 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 ECH1Q13011 328 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 TRA2AQ13595 282 aaKnown RBP eCLIP10.35□□□□□ -0.75
PTPRN-204ENST00000423636 RAB12Q6IQ22 244 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 PGAP1Q75T13 922 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 CXorf67Q86X51 503 aaPredicted RBP10.35□□□□□ -0.75
PTPRN-204ENST00000423636 TERB2Q8NHR7 220 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 RRNAD1Q96FB5 475 aaKnown RBP10.35□□□□□ -0.75
PTPRN-204ENST00000423636 PRRT1Q99946 306 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 UQCC2Q9BRT2 126 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 OR2H1Q9GZK4 316 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 ST3GAL6Q9Y274 331 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 TNRC6BQ9UPQ9 1833 aaKnown RBP10.35□□□□□ -0.75
PTPRN-204ENST00000423636 TSPAN4O14817 238 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 CELA3BP08861 270 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 HOXA6P31267 233 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 GSK3AP49840 483 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 ERVS71-1P61550 626 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 RPS27AP62979 156 aaKnown RBP10.35□□□□□ -0.75
PTPRN-204ENST00000423636 PXDC1Q5TGL8 231 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 FAM27BQ5VT28 67 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 SLC38A6Q8IZM9 456 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 OR56B1Q8NGI3 324 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 OR5L1Q8NGL2 311 aa10.35□□□□□ -0.75
PTPRN-204ENST00000423636 TEX13DA0A0J9YY54 714 aaPredicted RBP10.34□□□□□ -0.75
PTPRN-204ENST00000423636 HS3ST1O14792 307 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 BET1O15155 118 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 TNFSF12O43508 249 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 NMBP08949 121 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 RPA2P15927 270 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 HAAOP46952 286 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 MEOX1P50221 254 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 LSM6P62312 80 aaKnown RBP10.34□□□□□ -0.75
PTPRN-204ENST00000423636 BTN1A1Q13410 526 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 SUMF1Q8NBK3 374 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 PHB2Q99623 299 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 SLC25A21Q9BQT8 299 aaPredicted RBP10.34□□□□□ -0.75
PTPRN-204ENST00000423636 ADAT1Q9BUB4 502 aaKnown RBP10.34□□□□□ -0.75
PTPRN-204ENST00000423636 CHST5Q9GZS9 411 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 ZNF442Q9H7R0 627 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 SLC17A5Q9NRA2 495 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 B3GNT2Q9NY97 397 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 DOCK11Q5JSL3 2073 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 A0A087WZY1 265 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 NPIPB13A6NJU9 1138 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 NPIPB4C9JG80 1138 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 MFNGO00587 321 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 DIRAS3O95661 229 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 CRYZL1O95825 349 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 CD74P04233 296 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 RRASP10301 218 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 ARG2P78540 354 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 AKIRIN2Q53H80 203 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 MEX3BQ6ZN04 569 aaKnown RBP10.34□□□□□ -0.75
PTPRN-204ENST00000423636 ZNF100Q8IYN0 542 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 OR5M8Q8NGP6 311 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 THRSPQ92748 146 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 PPA2Q9H2U2 334 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 SDHAF2Q9NX18 166 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 STARD10Q9Y365 291 aa10.34□□□□□ -0.75
PTPRN-204ENST00000423636 H0YIZ8 118 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 YKT6O15498 198 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 XRCC2O43543 280 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ONECUT2O95948 504 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 HPP00738 406 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 F12P00748 615 aaPredicted RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 WT1P19544 449 aaPredicted RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ID4P47928 161 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 SUPT4H1P63272 117 aaKnown RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 FAM3AP98173 230 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 RIPPLY1Q0D2K3 151 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms