RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MKXQ8IYA7 352 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 OR51E1Q8TCB6 317 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 C17orf50Q8WW18 174 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 AQP3Q92482 292 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 RORBQ92753 470 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 ITFG2Q969R8 447 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 SDSLQ96GA7 329 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 TTTY10Q9BZA0 68 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 YIPF3Q9GZM5 350 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 SLC25A19Q9HC21 320 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 GPR84Q9NQS5 396 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 C19orf12Q9NSK7 152 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 RASL12Q9NYN1 266 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 ENPP5Q9UJA9 477 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 IKZF2Q9UKS7 526 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 GTF2A1LQ9UNN4 478 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 PIGLQ9Y2B2 252 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 AP4S1Q9Y587 144 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 G3V2T6 193 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 SLC2A5P22732 501 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
COL18A1-205ENST00000423214 EFNB2P52799 333 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 PTGES3Q15185 160 aaKnown RBP13.15□□□□□ -0.3
COL18A1-205ENST00000423214 ATP6AP1Q15904 470 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 ZBTB37Q5TC79 503 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 HCP5Q6MZN7 132 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 ACP7Q6ZNF0 438 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 ZNF561Q8N587 486 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 KLHDC1Q8N7A1 406 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 POC1AQ8NBT0 407 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 NPFFR1Q9GZQ6 430 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 PBOV1Q9GZY1 135 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 HEXA-AS1Q9H8Q6 139 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 SIGLEC9Q9Y336 463 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 TMEM14AQ9Y6G1 99 aa13.15□□□□□ -0.3
COL18A1-205ENST00000423214 RFPL4AA6NLU0 287 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 RFPL4AL1F8VTS6 287 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 J3QT63 122 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 M0R129 80 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 PRKYO43930 277 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 MTRF1O75570 445 aaKnown RBP13.14□□□□□ -0.31
COL18A1-205ENST00000423214 DHRS3O75911 302 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 NXPH2O95156 264 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 NRASP01111 189 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 COX7A1P24310 79 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 FASP25445 335 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 EPHA2P29317 976 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 HAAOP46952 286 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 BMXP51813 675 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 LGALS4P56470 323 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 AANATQ16613 207 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 BCDIN3DQ7Z5W3 292 aaKnown RBP13.14□□□□□ -0.31
COL18A1-205ENST00000423214 DTX3Q8N9I9 347 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 PPP1R35Q8TAP8 253 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 ASB17Q8WXJ9 295 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 NKX3-1Q99801 234 aaPredicted RBP13.14□□□□□ -0.31
COL18A1-205ENST00000423214 MOB1AQ9H8S9 216 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 USE1Q9NZ43 259 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 NUFIP1Q9UHK0 495 aaKnown RBP13.14□□□□□ -0.31
COL18A1-205ENST00000423214 POLDIP2Q9Y2S7 368 aa13.14□□□□□ -0.31
COL18A1-205ENST00000423214 ZNF254O75437 659 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 KIR2DS4P43632 304 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 CEBPDP49716 269 aaPredicted RBP13.13□□□□□ -0.31
COL18A1-205ENST00000423214 ERVFRD-1P60508 538 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 ESRRGP62508 458 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 ZNF573Q86YE8 665 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 ZNF679Q8IYX0 411 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 DNAJC9Q8WXX5 260 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 ZNF488Q96MN9 340 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 OR8B4Q96RC9 309 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 CNN2Q99439 309 aaKnown RBP13.13□□□□□ -0.31
COL18A1-205ENST00000423214 TEAD3Q99594 435 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 PRRG3Q9BZD7 231 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 MEGF9Q9H1U4 602 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 OR14J1Q9UGF5 321 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.311e-13■■□□□ 13.4
COL18A1-205ENST00000423214 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
COL18A1-205ENST00000423214 CCDC182A6NF36 153 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 LOC110117498-PIK3R3F6TDL0 507 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 G3V4G9 280 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 CIB2O75838 187 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 OPN1MWP04001 364 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 PGA5P0DJD9 388 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 OPN1MW2P0DN77 364 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 OPN1MW3P0DN78 364 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 VSIG10L2P0DP72 767 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 PAX6P26367 422 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 MFGE8Q08431 387 aaPredicted RBP13.12□□□□□ -0.31
COL18A1-205ENST00000423214 CLVS2Q5SYC1 327 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 BCL2L15Q5TBC7 163 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 ZNF782Q6ZMW2 699 aaPredicted RBP13.12□□□□□ -0.31
COL18A1-205ENST00000423214 ZDHHC13Q8IUH4 622 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 CD177Q8N6Q3 437 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 TCEANCQ8N8B7 351 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 OR4M1Q8NGD0 313 aa13.12□□□□□ -0.31
COL18A1-205ENST00000423214 OR2T27Q8NH04 317 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms