RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 MTCP1P56278 107 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 LOXL1Q08397 574 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-202ENST00000422544 ZMYND11Q15326 602 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 NEDD8Q15843 81 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 SSX1Q16384 188 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 UBE2UQ5VVX9 321 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF529Q6P280 563 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 RNF144BQ7Z419 303 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 CEACAM19Q7Z692 300 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 LRRC28Q86X40 367 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-202ENST00000422544 PRIMA1Q86XR5 153 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 CALHM1Q8IU99 346 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 C1orf87Q8N0U7 546 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 MS4A15Q8N5U1 240 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 GCSAMQ8N6F7 178 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 DNAAF1Q8NEP3 725 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 OR51A2Q8NGJ7 313 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 CLDND2Q8NHS1 167 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF671Q8TAW3 534 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 AQP3Q92482 292 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 FCGR1BQ92637 280 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 RFT1Q96AA3 541 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 SPSB1Q96BD6 273 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 SEH1LQ96EE3 360 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 DERL3Q96Q80 235 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 SPACA5Q96QH8 159 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF696Q9H7X3 374 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 TMEM165Q9HC07 324 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 NOX4Q9NPH5 578 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 PLA2G2EQ9NZK7 142 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 PPIAL4AQ9Y536 164 aa7.78□□□□□ -1.16
PDGFC-202ENST00000422544 SONP18583 2426 aaKnown RBP7.78□□□□□ -1.16
PDGFC-202ENST00000422544 TRAV8-7A0A075B6U6 113 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 IGHV3OR15-7A0A075B7D8 119 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 A0A087WXM4 84 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 J3QT63 122 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 LGALS8O00214 317 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 HCKP08631 526 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 IGFBP3P17936 291 aaPredicted RBP7.77□□□□□ -1.17
PDGFC-202ENST00000422544 MDH2P40926 338 aaKnown RBP7.77□□□□□ -1.17
PDGFC-202ENST00000422544 ATP1B3P54709 279 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 PPP3R1P63098 170 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 FAM27D1Q5T7N8 215 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 UNQ9370/PRO34162Q6UXP9 181 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 LHFPL2Q6ZUX7 228 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 SATL1Q86VE3 508 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 BATF2Q8N1L9 274 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 OR52N4Q8NGI2 321 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 OR10Z1Q8NGY1 313 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 C18orf12Q96KH6 178 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 COX4I2Q96KJ9 171 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 ZNF488Q96MN9 340 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 GAL3ST1Q99999 423 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 WDR13Q9H1Z4 485 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 PPIL3Q9H2H8 161 aaKnown RBP7.77□□□□□ -1.17
PDGFC-202ENST00000422544 NEK6Q9HC98 313 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 CKLFQ9UBR5 152 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 SF3B6Q9Y3B4 125 aaKnown RBP7.77□□□□□ -1.17
PDGFC-202ENST00000422544 DYSFO75923 2080 aa7.77□□□□□ -1.17
PDGFC-202ENST00000422544 CHD3Q12873 2000 aaKnown RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 MAGEA13PA6NCF6 341 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 OOEPA6NGQ2 149 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 KIAA1324LA8MWY0 1029 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 SRRM5B3KS81 715 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 CCRL2O00421 344 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 MAGEB3O15480 346 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 SPRY1O43609 319 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 GPX5O75715 221 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 GYPAP02724 150 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 MAS1P04201 325 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 INHBBP09529 407 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 PGA5P0DJD9 388 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 GLRA1P23415 457 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 MPZP25189 248 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 PSMA1P25786 263 aaKnown RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 MAPK3P27361 379 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 GABRA5P31644 462 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 POU3F4P49335 361 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 GP2P55259 537 aaKnown RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 LMO4P61968 165 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 FABP5Q01469 135 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 IL24Q13007 206 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 PDZK1IP1Q13113 114 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 TRAM1Q15629 374 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 KISS1Q15726 138 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 TMEM249Q2WGJ8 235 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 ZNF404Q494X3 552 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 TMEM155Q4W5P6 130 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 SYT6Q5T7P8 510 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 TEX36Q5VZQ5 186 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 CRIP3Q6Q6R5 217 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 LYPD2Q6UXB3 125 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 TMEM91Q6ZNR0 172 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 SLC25A26Q70HW3 274 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 POC1AQ8NBT0 407 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 OR5T2Q8NGG2 359 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 OR5D18Q8NGL1 313 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 SLAMF9Q96A28 289 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 NR1H4Q96RI1 486 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms