RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 NRIP2Q9BQI9 281 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 DCTN5Q9BTE1 182 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 CHST5Q9GZS9 411 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 PRDM13Q9H4Q3 707 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 ERVK13-1Q9NX77 482 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 MAB21L2Q9Y586 359 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 PCDHGB1Q9Y5G3 927 aa17.01■□□□□ 0.31
PKNOX1-202ENST00000418336 IGKV1-9A0A0C4DH69 117 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 A0A1B0GVI7 797 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 ANKRD61A6NGH8 418 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 E9PI62 339 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 CASQ2O14958 399 aaPredicted RBP17■□□□□ 0.31
PKNOX1-202ENST00000418336 ECDO95905 644 aaPredicted RBP17■□□□□ 0.31
PKNOX1-202ENST00000418336 LIPFP07098 398 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 GLRA1P23415 457 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 OGFRL1Q5TC84 451 aaPredicted RBP17■□□□□ 0.31
PKNOX1-202ENST00000418336 LAIR2Q6ISS4 152 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 SLC36A1Q7Z2H8 476 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 FAM220AQ7Z4H9 259 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 LHFPL3Q86UP9 236 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 ANGPTL5Q86XS5 388 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 SYS1Q8N2H4 156 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 BPIFB2Q8N4F0 458 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 CD177Q8N6Q3 437 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 CCDC54Q8NEL0 328 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 OR51A4Q8NGJ6 313 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 ST8SIA4Q92187 359 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 SDSLQ96GA7 329 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 WDFY2Q96P53 400 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 ALG8Q9BVK2 526 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 RASL12Q9NYN1 266 aa17■□□□□ 0.31
PKNOX1-202ENST00000418336 LIMS3P0CW19 117 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 LIMS4P0CW20 117 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 IKZF1Q13422 519 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 LRRC36Q1X8D7 754 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 EGFL6Q8IUX8 553 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 PACRGLQ8N7B6 248 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 Q8N7P7 452 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 ZNF671Q8TAW3 534 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 CNIH3Q8TBE1 160 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 FAM216AQ8WUB2 273 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 C10orf35Q96D05 121 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 Q96MT0 163 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 FGF20Q9NP95 211 aaPredicted RBP16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 DNAJB11Q9UBS4 358 aa16.99■□□□□ 0.31
PKNOX1-202ENST00000418336 CENPVL3A0A0U1RRI6 287 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 SNTNA6NMZ2 147 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 F8VVB4 439 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 F8VWA3 439 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 J3QLW9 94 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 ZNF19P17023 458 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 FPR2P25090 351 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 CAV3P56539 151 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 ACTA2P62736 377 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 UBA52P62987 128 aaKnown RBP16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 ACTG2P63267 376 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 IL24Q13007 206 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 RNF144BQ7Z419 303 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 ZNF573Q86YE8 665 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 PNLDC1Q8NA58 520 aaKnown RBP16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 DMRTB1Q96MA1 342 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 PKIBQ9C010 78 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 CNTD2Q9H8S5 307 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 INPP5EQ9NRR6 644 aa16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 RPL36Q9Y3U8 105 aaKnown RBP16.98■□□□□ 0.31
PKNOX1-202ENST00000418336 MDFIC2A0A1B0GVS7 189 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 GPR37O15354 613 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 ARF6P62330 175 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 IL13RA1P78552 427 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 ALKBH1Q13686 389 aaKnown RBP16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 TMEM244Q5VVB8 128 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 RUSC1-AS1Q66K80 236 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 BRD3OSQ6XYD6 125 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 ZNRF1Q8ND25 227 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 TRMT10AQ8TBZ6 339 aaKnown RBP16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 RPS4Y2Q8TD47 263 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 TNFRSF14Q92956 283 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 TMIGD2Q96BF3 282 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 PCGF1Q9BSM1 259 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 MTCH1Q9NZJ7 389 aa16.97■□□□□ 0.31
PKNOX1-202ENST00000418336 DNAJC9-AS1A6NH13 148 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 NDUFB3O43676 98 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 TOX4O94842 621 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 FADS2O95864 444 aaKnown RBP16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 HTR1AP08908 422 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 UTS2BQ765I0 119 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 BATF2Q8N1L9 274 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 ZNF555Q8NEP9 628 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 NPRL2Q8WTW4 380 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 FBLIM1Q8WUP2 373 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 PP6455Q8WZ26 134 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 MED30Q96HR3 178 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 ELL3Q9HB65 397 aaPredicted RBP16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 C8orf4Q9NR00 106 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 SLC25A10Q9UBX3 287 aaPredicted RBP16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 KPTNQ9Y664 436 aa16.96■□□□□ 0.31
PKNOX1-202ENST00000418336 FAM230AA0A1W2PPH8 454 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 NKX6-3A6NJ46 265 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 RFPL4AA6NLU0 287 aa16.95■□□□□ 0.3
PKNOX1-202ENST00000418336 RFPL4AL1F8VTS6 287 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms