RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 LINC00518Q8N0U6 118 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 OR1S1Q8NH92 325 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 RPS4Y2Q8TD47 263 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 SNX33Q8WV41 574 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 ORAI1Q96D31 301 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 PLPPR2Q96GM1 343 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 ARL6Q9H0F7 186 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 TAS2R8Q9NYW2 309 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 V9GY05 133 aa12.54□□□□□ -0.4
SGCE-202ENST00000415788 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 F5H5P2 479 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 ARPC5O15511 151 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 CELA3BP08861 270 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 ANXA7P20073 488 aaKnown RBP12.53□□□□□ -0.4
SGCE-202ENST00000415788 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
SGCE-202ENST00000415788 NAAAQ02083 359 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 BSPH1Q075Z2 132 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 RBMS2Q15434 407 aaKnown RBP12.53□□□□□ -0.4
SGCE-202ENST00000415788 STPG2Q8N412 459 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 CLRN3Q8NCR9 226 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 SMAP2Q8WU79 429 aaPredicted RBP12.53□□□□□ -0.4
SGCE-202ENST00000415788 POM121L2Q96KW2 1035 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 DERL3Q96Q80 235 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 NOX4Q9NPH5 578 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 FBXO9Q9UK97 447 aaPredicted RBP12.53□□□□□ -0.4
SGCE-202ENST00000415788 PRELID3BQ9Y3B1 194 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 DPRXA6NFQ7 191 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 CD3EP07766 207 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 RPA2P15927 270 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 ART1P52961 327 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 ROM1Q03395 351 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 TAF13Q15543 124 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 HES5Q5TA89 166 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 UNQ6126/PRO20091Q6UXV3 157 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 SLC36A1Q7Z2H8 476 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 OR10S1Q8NGN2 331 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 SYNPRQ8TBG9 265 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 SPTSSAQ969W0 71 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 SLITRK2Q9H156 845 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 CDH20Q9HBT6 801 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 CENPMQ9NSP4 180 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 COPS3Q9UNS2 423 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 KLHDC2Q9Y2U9 406 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 ZNF281Q9Y2X9 895 aa12.53□□□□□ -0.4
SGCE-202ENST00000415788 IGHV2OR16-5A0A0B4J2B6 119 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 C5orf49A4QMS7 147 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 A6NNC1 897 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 ZNF254O75437 659 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 APOC1P02654 83 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 UBBP0CG47 229 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 UBCP0CG48 685 aaKnown RBP12.52□□□□□ -0.41
SGCE-202ENST00000415788 ZNF35P13682 527 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 HCCSP53701 268 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 RPS27AP62979 156 aaKnown RBP12.52□□□□□ -0.41
SGCE-202ENST00000415788 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.41
SGCE-202ENST00000415788 KRTAP27-1Q3LI81 207 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 KRT77Q7Z794 578 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 MYPOPQ86VE0 399 aaPredicted RBP12.52□□□□□ -0.41
SGCE-202ENST00000415788 ZNF679Q8IYX0 411 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 OR8B4Q96RC9 309 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 AMELYQ99218 206 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 GFI1Q99684 422 aa12.52□□□□□ -0.41
SGCE-202ENST00000415788 LOC100509620A0A075B734 347 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 LGALS8O00214 317 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 H2BFMP0C1H6 154 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 HSD11B1P28845 292 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 OTX1P32242 354 aaPredicted RBP12.51□□□□□ -0.41
SGCE-202ENST00000415788 ZNF660Q6AZW8 331 aaPredicted RBP12.51□□□□□ -0.41
SGCE-202ENST00000415788 LRRN1Q6UXK5 716 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.51□□□□□ -0.41
SGCE-202ENST00000415788 OR2AK2Q8NG84 335 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 MRPS24Q96EL2 167 aaKnown RBP12.51□□□□□ -0.41
SGCE-202ENST00000415788 PIK3IP1Q96FE7 263 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 GINS4Q9BRT9 223 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 MS4A7Q9GZW8 240 aaPredicted RBP12.51□□□□□ -0.41
SGCE-202ENST00000415788 GNG8Q9UK08 70 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 RNF115Q9Y4L5 304 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 HELZ2Q9BYK8 2649 aaKnown RBP12.51□□□□□ -0.41
SGCE-202ENST00000415788 J3QW42 95 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 DNASE2O00115 360 aaPredicted RBP12.51□□□□□ -0.41
SGCE-202ENST00000415788 PIN1P1O15428 100 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 SIAH2O43255 324 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 CSF1P09603 554 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 CCNOP22674 350 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 DCTDP32321 178 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 TAS2R20P59543 309 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 ZMYND11Q15326 602 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 SLC22A25Q6T423 547 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 DRAM2Q6UX65 266 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 TMEM17Q86X19 198 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 C1orf174Q8IYL3 243 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 MARC2Q969Z3 335 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 TMEM204Q9BSN7 226 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 OR5V1Q9UGF6 321 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 IKZF2Q9UKS7 526 aa12.51□□□□□ -0.41
SGCE-202ENST00000415788 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
SGCE-202ENST00000415788 FXYD6-FXYD2A0A087WZ82 144 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms