RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 IGLV2-11P01706 119 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ALDH3B2P48448 385 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 CX3CR1P49238 355 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 BLVRAP53004 296 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 PLK1P53350 603 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 MAXP61244 160 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 TGIF1Q15583 401 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 LTB4RQ15722 352 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ZNF672Q499Z4 452 aaPredicted RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 PTRHD1Q6GMV3 140 aaKnown RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 ULK3Q6PHR2 472 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 XKRXQ6PP77 449 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 GCNT7Q6ZNI0 430 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 DCXRQ7Z4W1 244 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 TMEM135Q86UB9 458 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 BBS7Q8IWZ6 715 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 OR5P2Q8WZ92 322 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 RORBQ92753 470 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 IMP4Q96G21 291 aaKnown RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 GMPPAQ96IJ6 420 aaPredicted RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 COPS4Q9BT78 406 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 KIFC1Q9BW19 673 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 PTGES2Q9H7Z7 377 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 DDX31Q9H8H2 851 aaKnown RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 UGT1A7Q9HAW7 530 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 UGT1A8Q9HAW9 530 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 IFT46Q9NQC8 304 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 SIRT7Q9NRC8 400 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 FGFR1OP2Q9NVK5 253 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 SMPXQ9UHP9 88 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 SLC17A4Q9Y2C5 497 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 AHCTF1Q8WYP5 2266 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ABCA2Q9BZC7 2435 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 LOC100131303A0A0U1RQF7 123 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 NKX6-3A6NJ46 265 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 PDZK1P1A8MUH7 402 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 C21orf140B9A014 251 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 CD55P08174 381 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 GATA1P15976 413 aaPredicted RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 COX5AP20674 150 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 RANP62826 216 aaKnown RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 IRX1P78414 480 aaPredicted RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 SRSF6Q13247 344 aaKnown RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 CST6Q15828 149 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 MS4A18Q3C1V0 323 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 GUSBP11Q6P575 273 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 TFAP2EQ6VUC0 442 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 AHSA2Q719I0 299 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ARRDC1Q8N5I2 433 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 OR5D18Q8NGL1 313 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 STMN2Q93045 179 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 CREB3L1Q96BA8 519 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 PGLYRP4Q96LB8 373 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 MICU1Q9BPX6 476 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 KLHDC3Q9BQ90 382 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 PITPNM3Q9BZ71 974 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 MCUBQ9NWR8 336 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 SLC39A1Q9NY26 324 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 THYN1Q9P016 225 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 MLXQ9UH92 298 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 V9GYY9 64 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 FRYLO94915 3013 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 SPTA1P02549 2419 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 IGKV2D-30A0A075B6S6 120 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 TRAV8-7A0A075B6U6 113 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 A0A1W2PQ67 120 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 SLC22A20A6NK97 555 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 A8MUA0 341 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 H7C1H1 209 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 KMOO15229 486 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 XRCC2O43543 280 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 OR7A10O76100 309 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 MPZL1O95297 269 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 FARS2O95363 451 aaKnown RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 APOA1P02647 267 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 C1QAP02745 245 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ALDOBP05062 364 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 FGF1P05230 155 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 PAX1P15863 534 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 TAC1P20366 129 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 RANBP1P43487 201 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 CDC34P49427 236 aaPredicted RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 ERVK-16P61578 105 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 RHOAP61586 193 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 LSM6P62312 80 aaKnown RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 SSBP2P81877 361 aaPredicted RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 RIPPLY1Q0D2K3 151 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 LINC00242Q5T6M2 205 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 IGFL2Q6UWQ7 119 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 TIFABQ6ZNK6 161 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 C9orf47Q6ZRZ4 202 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 CCDC121Q6ZUS5 278 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ACOT7LQ6ZUV0 252 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 CMC1Q7Z7K0 106 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 WDR31Q8NA23 367 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 BLOC1S5Q8TDH9 187 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 LMX1AQ8TE12 382 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 SCGB3A2Q96PL1 93 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 PDFQ9HBH1 243 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms