RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A8PA6NJQ4 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 RFPL4AA6NLU0 287 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A22PA8MWA6 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 MCRIP1C9JLW8 97 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 RFPL4AL1F8VTS6 287 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 F10P00742 488 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 HLA-AP01891 365 aaKnown RBP11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 RPA2P15927 270 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 AMY2BP19961 511 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 SERPINA2P20848 420 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 DTYMKP23919 212 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FPR2P25090 351 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 ACKR3P25106 362 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 RAB14P61106 215 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 IL13RA1P78552 427 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 CYCSP99999 105 aaKnown RBP11.79□□□□□ -0.52
LIMS1-205ENST00000410093 SRYQ05066 204 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 SFRP5Q5T4F7 317 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 TUSC5Q8IXB3 177 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 GVQW1Q8N7I0 195 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 LDAHQ9H6V9 325 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 HEXA-AS1Q9H8Q6 139 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 GPR173Q9NS66 373 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 COMMD9Q9P000 198 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 UBQLN2Q9UHD9 624 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 VSIG4Q9Y279 399 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 CHD6Q8TD26 2715 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 C5orf63A6NC05 138 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 CELA3AP09093 270 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF35P13682 527 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 MPGP29372 298 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 H2BFSP57053 126 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 OPCMLQ14982 345 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 NKPD1Q17RQ9 610 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 MICBQ29980 383 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 IGFL2Q6UWQ7 119 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 PEG10Q86TG7 708 aaKnown RBP11.78□□□□□ -0.52
LIMS1-205ENST00000410093 OR5AP2Q8NGF4 316 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 FNDC9Q8TBE3 224 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 HES7Q9BYE0 225 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 CALHM2Q9HA72 323 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 ELL3Q9HB65 397 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-205ENST00000410093 PLEKHJ1Q9NW61 149 aa11.78□□□□□ -0.52
LIMS1-205ENST00000410093 NOP16Q9Y3C1 178 aaKnown RBP11.78□□□□□ -0.52
LIMS1-205ENST00000410093 A0A0D9SG52 128 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 ARGFXA6NJG6 315 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 NOS1APO75052 506 aaPredicted RBP11.77□□□□□ -0.52
LIMS1-205ENST00000410093 TSC22D2O75157 780 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 CNOT4O95628 575 aaKnown RBP11.77□□□□□ -0.52
LIMS1-205ENST00000410093 CST4P01036 141 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 PMP2P02689 132 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 SLC25A4P12235 298 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 ANOS1P23352 680 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 S100A11P31949 105 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 TNFSF10P50591 281 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 SNU13P55769 128 aaKnown RBP11.77□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF92Q03936 586 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 HGFACQ04756 655 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 CLN3Q13286 438 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 PLEKHN1Q494U1 663 aaPredicted RBP11.77□□□□□ -0.52
LIMS1-205ENST00000410093 CLLU1Q5K131 121 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 OR52W1Q6IF63 320 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 RFPL4BQ6ZWI9 263 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 C1QL2Q7Z5L3 287 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.77□□□□□ -0.52
LIMS1-205ENST00000410093 LHFPL1Q86WI0 220 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 Q8NFD4 153 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 OR5L1Q8NGL2 311 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 OR2AE1Q8NHA4 323 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 ELMOD3Q96FG2 381 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 WDYHV1Q96HA8 205 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 REPIN1Q9BWE0 567 aaKnown RBP11.77□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF552Q9H707 407 aaPredicted RBP11.77□□□□□ -0.52
LIMS1-205ENST00000410093 GPR132Q9UNW8 380 aa11.77□□□□□ -0.52
LIMS1-205ENST00000410093 MYO7BQ6PIF6 2116 aa11.77□□□□□ -0.53
LIMS1-205ENST00000410093 AHCTF1Q8WYP5 2266 aa11.77□□□□□ -0.53
LIMS1-205ENST00000410093 LINC00862A6NCI5 91 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 SLC22A20A6NK97 555 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 EFSO43281 561 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 TOXO94900 526 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 IGHG3P01860 377 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 HOXB1P14653 301 aaPredicted RBP11.76□□□□□ -0.53
LIMS1-205ENST00000410093 PPP3CBP16298 524 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 PDZK1IP1Q13113 114 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 ZNF345Q14585 488 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 CHRFAM7AQ494W8 412 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 NPRL2Q8WTW4 380 aa11.76□□□□□ -0.53
LIMS1-205ENST00000410093 EMG1Q92979 244 aaKnown RBP11.76□□□□□ -0.53
LIMS1-205ENST00000410093 GMPPAQ96IJ6 420 aaPredicted RBP11.76□□□□□ -0.53
LIMS1-205ENST00000410093 PPA2Q9H2U2 334 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms