RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 DLGAP1O14490 977 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 DYNC1I1O14576 645 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 TTRP02766 147 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 EGR3Q06889 387 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 MFGE8Q08431 387 aaPredicted RBP12.06□□□□□ -0.48
CBX3-203ENST00000409747 ACP7Q6ZNF0 438 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 Q6ZSV7 163 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 BEND2Q8NDZ0 799 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 TMEM163Q8TC26 289 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 ELL3Q9HB65 397 aaPredicted RBP12.06□□□□□ -0.48
CBX3-203ENST00000409747 CLN6Q9NWW5 311 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 SNX5Q9Y5X3 404 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 hCG_1809904A0A1W2PP81 198 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 A0A1W2PPE2 198 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 A0A1W2PR64 198 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 A0A1W2PRV1 198 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 ANKRD61A6NGH8 418 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 G3V2T6 193 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 SRSF10O75494 262 aaKnown RBP12.06□□□□□ -0.48
CBX3-203ENST00000409747 TSPAN9O75954 239 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 PGA5P0DJD9 388 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 HAAOP46952 286 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 DLX1P56177 255 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 DEFA6Q01524 100 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
CBX3-203ENST00000409747 ATP6AP1Q15904 470 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 AADACL4Q5VUY2 407 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 SLX4IPQ5VYV7 408 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 TMEM42Q69YG0 159 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 ELMOD2Q8IZ81 293 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 TCEANCQ8N8B7 351 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 UBE2FQ969M7 185 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 ADGRL4Q9HBW9 690 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 TCF7L1Q9HCS4 588 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 OR52A1Q9UKL2 312 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 V9GYS6 101 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 RFPL4AA6NLU0 287 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 ZAR1LA6NP61 321 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 RFPL4AL1F8VTS6 287 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 ANGPTL7O43827 346 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 NOS1APO75052 506 aaPredicted RBP12.05□□□□□ -0.48
CBX3-203ENST00000409747 NXPH2O95156 264 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 C12orf73Q69YU5 71 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 ZDHHC13Q8IUH4 622 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 OR51G2Q8NGK0 314 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 APOL4Q9BPW4 351 aa12.05□□□□□ -0.48
CBX3-203ENST00000409747 PQLC2LA1A4F0 135 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 KRT8P05787 483 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 FASP25445 335 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 PRDX2P32119 198 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 RASSF2P50749 326 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 RPL31P62899 125 aaKnown RBP12.04□□□□□ -0.48
CBX3-203ENST00000409747 PDLIM3Q53GG5 364 aaPredicted RBP12.04□□□□□ -0.48
CBX3-203ENST00000409747 DMRTC1Q5HYR2 192 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 PNKDQ8N490 385 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 PPP1R14AQ96A00 147 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 RBM4BQ9BQ04 359 aaKnown RBP12.04□□□□□ -0.48
CBX3-203ENST00000409747 CADM1Q9BY67 442 aaKnown RBP12.04□□□□□ -0.48
CBX3-203ENST00000409747 GABARAPL1Q9H0R8 117 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 HEXA-AS1Q9H8Q6 139 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 PLEKHA1Q9HB21 404 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 RAB18Q9NP72 206 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 GPR173Q9NS66 373 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 VWFP04275 2813 aa12.04□□□□□ -0.48
CBX3-203ENST00000409747 FCGR1AP12314 374 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 KRTAP10-3P60369 221 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 EFNB1P98172 346 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 AANATQ16613 207 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 KDM4DQ6B0I6 523 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 ASPHD2Q6ICH7 369 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 ASRGL1Q7L266 308 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 BCDIN3DQ7Z5W3 292 aaKnown RBP12.03□□□□□ -0.48
CBX3-203ENST00000409747 CD177Q8N6Q3 437 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 NRIP2Q9BQI9 281 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 C19orf12Q9NSK7 152 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 USE1Q9NZ43 259 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 WARS2Q9UGM6 360 aaKnown RBP12.03□□□□□ -0.48
CBX3-203ENST00000409747 MRM2Q9UI43 246 aaKnown RBP12.03□□□□□ -0.48
CBX3-203ENST00000409747 H3BUX3 64 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 M0R129 80 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 SYNGR1O43759 233 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 MITFO75030 526 aaPredicted RBP12.03□□□□□ -0.48
CBX3-203ENST00000409747 CCL1P22362 96 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 MPZP25189 248 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 C2orf68Q2NKX9 166 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 LRRC75BQ2VPJ9 315 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 C11orf88Q6PI97 169 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 Q6ZSR3 168 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 YIPF7Q8N8F6 280 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 DTX3Q8N9I9 347 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 CCDC54Q8NEL0 328 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 OR14K1Q8NGZ2 314 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 ZNF488Q96MN9 340 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 IL4I1Q96RQ9 567 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 SSX3Q99909 188 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 PKIBQ9C010 78 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 PPA2Q9H2U2 334 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
CBX3-203ENST00000409747 A0A1B0GTI1 187 aa12.02□□□□□ -0.49
CBX3-203ENST00000409747 GABRA5P31644 462 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms