RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CLRN3Q8NCR9 226 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 MSGN1A6NI15 193 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 CD74P04233 296 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 C1orf100Q5SVJ3 147 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 OGFOD3Q6PK18 319 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 OR10S1Q8NGN2 331 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 TERB2Q8NHR7 220 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 MFSD8Q8NHS3 518 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 CDC6Q99741 560 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 LRFN1Q9P244 771 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 ARHGAP21Q5T5U3 1957 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 E9PLN8 166 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 HS3ST1O14792 307 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 BPNT1O95861 308 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 CRHP06850 196 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 PCK2Q16822 640 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 PLPPR5Q32ZL2 321 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 WDSUB1Q8N9V3 476 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 MRGPRFQ96AM1 343 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 URM1Q9BTM9 101 aaKnown RBP11.75□□□□□ -0.53
COL6A2-204ENST00000409416 C20orf24Q9BUV8 137 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 OR5AC2Q9NZP5 309 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 FZR1Q9UM11 496 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 ZFHX4Q86UP3 3567 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 CCDC187A0A096LP49 1063 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 A0A1B0GTI1 187 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 DNASE2O00115 360 aaPredicted RBP11.75□□□□□ -0.53
COL6A2-204ENST00000409416 ABCD4O14678 606 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 MMP16P51512 607 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 CLEC18BQ6UXF7 455 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 NOXO1Q8NFA2 376 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 RDH5Q92781 318 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 ZNF488Q96MN9 340 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 MAGT1Q9H0U3 335 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 RALYQ9UKM9 306 aaKnown RBP11.75□□□□□ -0.53
COL6A2-204ENST00000409416 OTOGLQ3ZCN5 2332 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 ZGRF1Q86YA3 2104 aa11.75□□□□□ -0.53
COL6A2-204ENST00000409416 CD8AP01732 235 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 ZNF32P17041 273 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 SHBQ15464 509 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 KISS1Q15726 138 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 SNAI3Q3KNW1 292 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 PLAC9Q5JTB6 97 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 ABHD17BQ5VST6 288 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 SLC25A24Q6NUK1 477 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 OPN5Q6U736 354 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 BAP18Q8IXM2 172 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 SPAG16Q8N0X2 631 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 CNEP1R1Q8N9A8 125 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 OR5AP2Q8NGF4 316 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 FNDC9Q8TBE3 224 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 SECTM1Q8WVN6 248 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 ARL11Q969Q4 196 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 RRNAD1Q96FB5 475 aaKnown RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 LPAR5Q9H1C0 372 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 PIGMQ9H3S5 423 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 FN3KRPQ9HA64 309 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 B3GALT5Q9Y2C3 310 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 LOXL2Q9Y4K0 774 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 HS3ST3B1Q9Y662 390 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 CDC14BO60729 498 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 RBMXL2O75526 392 aaKnown RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 RAD51DO75771 328 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 DUS4LO95620 317 aaKnown RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 RAB32Q13637 225 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 RBM39Q14498 530 aaKnown RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 PIGYQ3MUY2 71 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 KCNG3Q8TAE7 436 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 POC1BQ8TC44 478 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 PFDN5Q99471 154 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 MED9Q9NWA0 146 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 P4HTMQ9NXG6 502 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 A0A0A6YYD4 124 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 LDLRAD4O15165 306 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 HOXA4Q00056 320 aaPredicted RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 OR2B11Q5JQS5 317 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 RABEPKQ7Z6M1 372 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 ZNF100Q8IYN0 542 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 ZDHHC22Q8N966 263 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 ZSCAN4Q8NAM6 433 aaPredicted RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 ST8SIA1Q92185 356 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 NAT6Q93015 286 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 CNTNAP3BQ96NU0 1288 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 ZNF2Q9BSG1 426 aaPredicted RBP11.74□□□□□ -0.53
COL6A2-204ENST00000409416 OR10A2Q9H208 303 aa11.74□□□□□ -0.53
COL6A2-204ENST00000409416 H3BP45 60 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 DHHO43323 396 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 MED6O75586 246 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 HIST1H1DP16402 221 aaKnown RBP11.73□□□□□ -0.53
COL6A2-204ENST00000409416 RCC1P18754 421 aaPredicted RBP11.73□□□□□ -0.53
COL6A2-204ENST00000409416 RAB6AP20340 208 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 CALCRP30988 508 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 ID4P47928 161 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 KCNJ3P48549 501 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 FOXG1P55316 489 aaPredicted RBP11.73□□□□□ -0.53
COL6A2-204ENST00000409416 PMP22Q01453 160 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 C9orf152Q5JTZ5 239 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms