RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	SAA4	P35542	130 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	ATP6V1E1	P36543	226 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	MDH1	P40925	334 aa	Known RBP	5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	KIR2DS4	P43632	304 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	UBE2E1	P51965	193 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SLC7A2	P52569	658 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	EFNB2	P52799	333 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SELENOW	P63302	87 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	HIST1H3A	P68431	136 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	KLF9	Q13886	244 aa	Predicted RBP	5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	MAPRE2	Q15555	327 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SNCB	Q16143	134 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	MEP1B	Q16820	701 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	NSUN5P1	Q3KNT7	163 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	IFI44L	Q53G44	452 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	COQ5	Q5HYK3	327 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	HIST2H3PS2	Q5TEC6	136 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	PXDC1	Q5TGL8	231 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	OTP	Q5XKR4	325 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	CORO6	Q6QEF8	472 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	DPY19L2P2	Q6ZN68	376 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	HIST2H3A	Q71DI3	136 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	TSEN54	Q7Z6J9	526 aa	Known RBP	5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	NDUFA11	Q86Y39	141 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	FTMT	Q8N4E7	242 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	GCSAM	Q8N6F7	178 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	LY6G5B	Q8NDX9	201 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	OR2T12	Q8NG77	320 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	OR9Q1	Q8NGQ5	310 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SLC7A13	Q8TCU3	470 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	C2CD4C	Q8TF44	421 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	LRRC29	Q8WV35	223 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	H1FX	Q92522	213 aa	Known RBP	5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	PHF21A	Q96BD5	680 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	TLCD1	Q96CP7	247 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	ZNF799	Q96GE5	643 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	GPX7	Q96SL4	187 aa	Predicted RBP	5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	CCL13	Q99616	98 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SIKE1	Q9BRV8	207 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	NSRP1	Q9H0G5	558 aa	Known RBP	5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SEMA6A	Q9H2E6	1030 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	ANKRD19P	Q9H560	264 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	RNPEPL1	Q9HAU8	725 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	GID8	Q9NWU2	228 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	RHCG	Q9UBD6	479 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	AASS	Q9UDR5	926 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	KCNG2	Q9UJ96	466 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	PRPF19	Q9UMS4	504 aa	Known RBP	5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	RABL2B	Q9UNT1	228 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	FOXJ3	Q9UPW0	622 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	AP3M1	Q9Y2T2	418 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	FAM32A	Q9Y421	112 aa	Known RBP	5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	IER3IP1	Q9Y5U9	82 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	LHFPL6	Q9Y693	200 aa		5.48	□□□□□ -1.53
CEACAM1-208	ENST00000403461	IGHV3OR15-7	A0A075B7D8	119 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461		A0A087WUU8	490 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461		A0A087X0M5	115 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461		A0A1B0GX30	115 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461		A0A1W2PPH5	198 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	ANXA2P2	A6NMY6	339 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	RHOD	O00212	210 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	IMPA2	O14732	288 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	MRAS	O14807	208 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	GLCE	O94923	617 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	PPP1R3D	O95685	299 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	ZNF682	O95780	498 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	ATP6V1B1	P15313	513 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	DDOST	P39656	456 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	DCTN2	Q13561	401 aa	Known RBP	5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	FHL1	Q13642	323 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	RBMS2	Q15434	407 aa	Known RBP	5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	TAF13	Q15543	124 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	LY6E	Q16553	131 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	AANAT	Q16613	207 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	LRRC75B	Q2VPJ9	315 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	RFX4	Q33E94	735 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	KRTAP27-1	Q3LI81	207 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	WDR38	Q5JTN6	314 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	METTL21C	Q5VZV1	264 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SMARCD3	Q6STE5	483 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	DRAM2	Q6UX65	266 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	CFAP77	Q6ZQR2	320 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	ZNF826P	Q6ZT77	177 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	DPY19L4	Q7Z388	723 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	RNF144B	Q7Z419	303 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	ARPIN	Q7Z6K5	226 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	LINC00346	Q8IVM7	164 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	FAM216B	Q8N7L0	139 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	NANOGP1	Q8N7R0	232 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	OR5D13	Q8NGL4	314 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	FANK1	Q8TC84	345 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	MED30	Q96HR3	178 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	NKX3-1	Q99801	234 aa	Predicted RBP	5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SSX3	Q99909	188 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	COPS4	Q9BT78	406 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	DCTN5	Q9BTE1	182 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	DNTTIP1	Q9H147	329 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SP140L	Q9H930	580 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SIGLEC7	Q9Y286	467 aa		5.47	□□□□□ -1.53
CEACAM1-208	ENST00000403461	SIGLEC9	Q9Y336	463 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms