RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SFT2D1Q8WV19 159 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 MAFIPQ8WZ33 124 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 TUBD1Q9UJT1 453 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 K7EPK0 472 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 DEDDO75618 318 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 SLC34A2O95436 690 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 FAM76BQ5HYJ3 339 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 OR2A2Q6IF42 318 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 FAM71E2Q8N5Q1 922 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 DEFB124Q8NES8 71 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 LYZL4Q96KX0 146 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 USB1Q9BQ65 265 aaKnown RBP17.36■□□□□ 0.37
CCDC47-202ENST00000403162 SULT4A1Q9BR01 284 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 SMCO4Q9NRQ5 59 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 PLA2G2EQ9NZK7 142 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 RARRES3Q9UL19 164 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 B3GALT1Q9Y5Z6 326 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 TRBV11-1A0A0K0K1C0 115 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 ZNF814B7Z6K7 855 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 E9PLN8 166 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 KNG1P01042 644 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 APOC1P02654 83 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 RHBDD2Q6NTF9 364 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 OPN5Q6U736 354 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 OR5D18Q8NGL1 313 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 EGLN1Q9GZT9 426 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 A0A1W2PNR3 127 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 HEXBP07686 556 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 CPT2P23786 658 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 CD80P33681 288 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 DHRS11Q6UWP2 260 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 C15orf54Q8N8G6 183 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 FNDC9Q8TBE3 224 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 C2CD4CQ8TF44 421 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 PGAM5Q96HS1 289 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 KIRREL1Q96J84 757 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 SLC7A5P2Q9GIP4 190 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 FBXL17Q9UF56 701 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 V9GYS6 101 aa17.35■□□□□ 0.37
CCDC47-202ENST00000403162 A0A0U1RQV5 110 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 C9JQL5 133 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 STMND1H3BQB6 276 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 CTSDP07339 412 aaPredicted RBP17.34■□□□□ 0.37
CCDC47-202ENST00000403162 ZNF43P17038 809 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 FCGR2CP31995 323 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 FAM3AP98173 230 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 SMCO1Q147U7 214 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 FOXRED2Q8IWF2 684 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 SEMA6DQ8NFY4 1073 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 DECR2Q9NUI1 292 aa17.34■□□□□ 0.37
CCDC47-202ENST00000403162 LOC102725191A0A1B0GVB3 256 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 C5orf63A6NC05 138 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 ZNF726A6NNF4 738 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 OPN1LWP04000 364 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 SERPINA2P20848 420 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 LSM6P62312 80 aaKnown RBP17.33■□□□□ 0.37
CCDC47-202ENST00000403162 HMGN3Q15651 99 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 Q6ZRG5 221 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 SULF2Q8IWU5 870 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 SGPP2Q8IWX5 399 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 OR5L2Q8NGL0 311 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 SLC25A43Q8WUT9 341 aaPredicted RBP17.33■□□□□ 0.37
CCDC47-202ENST00000403162 PP6455Q8WZ26 134 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 LIN37Q96GY3 246 aaPredicted RBP17.33■□□□□ 0.37
CCDC47-202ENST00000403162 CACFD1Q9UGQ2 172 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 TIMM10BQ9Y5J6 103 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 KPTNQ9Y664 436 aa17.33■□□□□ 0.37
CCDC47-202ENST00000403162 CRYM-AS1A6NIL9 109 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 DHRS3O75911 302 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 RAB5BP61020 215 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 DHRS13Q6UX07 377 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 Q6ZSR3 168 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 PPP1R3BQ86XI6 285 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 ZFP82Q8N141 532 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 UBAC2Q8NBM4 344 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 OR2M3Q8NG83 312 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 METTL7AQ9H8H3 244 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 ZNF701Q9NV72 531 aaPredicted RBP17.33■□□□□ 0.36
CCDC47-202ENST00000403162 AMDHD2Q9Y303 409 aa17.33■□□□□ 0.36
CCDC47-202ENST00000403162 IGKV1D-8A0A087WSZ0 117 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 AQP7P3A6NL99 342 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 AGPAT2O15120 278 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 RAMP1O60894 148 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 TIAF1O95411 115 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 CCL4P13236 92 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 TMEM33P57088 247 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 HABP2Q14520 560 aaPredicted RBP17.32■□□□□ 0.36
CCDC47-202ENST00000403162 UBE2V2Q15819 145 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 NPRL2Q8WTW4 380 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 HAS2Q92819 552 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 ZNF2Q9BSG1 426 aaPredicted RBP17.32■□□□□ 0.36
CCDC47-202ENST00000403162 STRADBQ9C0K7 418 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 CHST5Q9GZS9 411 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 PLEKHA2Q9HB19 425 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 MCTS1Q9ULC4 181 aaKnown RBP17.32■□□□□ 0.36
CCDC47-202ENST00000403162 ZFHX2Q9C0A1 2572 aaPredicted RBP17.32■□□□□ 0.36
CCDC47-202ENST00000403162 SCRG1O75711 98 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 IFNA21P01568 189 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 OR8U9P0C7N5 309 aa17.32■□□□□ 0.36
CCDC47-202ENST00000403162 NHLH1Q02575 133 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms