RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 C17orf78Q8N4C9 275 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 OR52H1Q8NGJ2 320 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 HPSE2Q8WWQ2 592 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 METTL17Q9H7H0 456 aaPredicted RBP10.02□□□□□ -0.81
SKA3-203ENST00000400018 UFSP2Q9NUQ7 469 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 EXTL2Q9UBQ6 330 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 CMAHPQ9Y471 501 aa10.02□□□□□ -0.81
SKA3-203ENST00000400018 LINC00862A6NCI5 91 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 CD300LBA8K4G0 201 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 TRAPPC2P0DI81 140 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 TRAPPC2BP0DI82 140 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 RAB3AP20336 220 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 PSMB1P20618 241 aaKnown RBP10.01□□□□□ -0.81
SKA3-203ENST00000400018 SERPINA2P20848 420 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 BDKRB2P30411 391 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 DCTDP32321 178 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 ZNF93P35789 620 aaPredicted RBP10.01□□□□□ -0.81
SKA3-203ENST00000400018 NPBWR2P48146 333 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 OR5D14Q8NGL3 314 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 DYRK2Q92630 601 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 REPIN1Q9BWE0 567 aaKnown RBP10.01□□□□□ -0.81
SKA3-203ENST00000400018 PPA2Q9H2U2 334 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 SAV1Q9H4B6 383 aaPredicted RBP10.01□□□□□ -0.81
SKA3-203ENST00000400018 ZCCHC4Q9H5U6 513 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 RHBDL1O75783 438 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 SLC22A5O76082 557 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 NRASP01111 189 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 MTCP1P56278 107 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 ECH1Q13011 328 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 PRDX4Q13162 271 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 IL18Q14116 193 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 KISS1Q15726 138 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 ZBTB37Q5TC79 503 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 SYNPRQ8TBG9 265 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 APOBEC3DQ96AK3 386 aaPredicted RBP10.01□□□□□ -0.81
SKA3-203ENST00000400018 NPDC1Q9NQX5 325 aaPredicted RBP10.01□□□□□ -0.81
SKA3-203ENST00000400018 CKLFQ9UBR5 152 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 ING4Q9UNL4 249 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 V9GYH0 126 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 V9GYS6 101 aa10.01□□□□□ -0.81
SKA3-203ENST00000400018 TRAV1-2A0A0B4J238 106 aa10□□□□□ -0.81
SKA3-203ENST00000400018 IGKV1-12A0A0C4DH73 117 aa10□□□□□ -0.81
SKA3-203ENST00000400018 A0A0U1RQV5 110 aa10□□□□□ -0.81
SKA3-203ENST00000400018 TMEM272A0A1B0GTI8 110 aa10□□□□□ -0.81
SKA3-203ENST00000400018 F5H5P2 479 aa10□□□□□ -0.81
SKA3-203ENST00000400018 HSPB6O14558 160 aa10□□□□□ -0.81
SKA3-203ENST00000400018 SULT1B1O43704 296 aa10□□□□□ -0.81
SKA3-203ENST00000400018 IGKV1D-12P01611 117 aa10□□□□□ -0.81
SKA3-203ENST00000400018 GRPP07492 148 aa10□□□□□ -0.81
SKA3-203ENST00000400018 ALDH3B1P43353 468 aa10□□□□□ -0.81
SKA3-203ENST00000400018 GUCA2AQ02747 115 aa10□□□□□ -0.81
SKA3-203ENST00000400018 RIN1Q13671 783 aa10□□□□□ -0.81
SKA3-203ENST00000400018 TRAM1Q15629 374 aa10□□□□□ -0.81
SKA3-203ENST00000400018 AANATQ16613 207 aa10□□□□□ -0.81
SKA3-203ENST00000400018 TIMM23BQ5SRD1 257 aa10□□□□□ -0.81
SKA3-203ENST00000400018 AWAT2Q6E213 333 aa10□□□□□ -0.81
SKA3-203ENST00000400018 GLIPR1L1Q6UWM5 242 aa10□□□□□ -0.81
SKA3-203ENST00000400018 Q6ZR03 302 aa10□□□□□ -0.81
SKA3-203ENST00000400018 RHOUQ7L0Q8 258 aa10□□□□□ -0.81
SKA3-203ENST00000400018 GLCCI1Q86VQ1 547 aa10□□□□□ -0.81
SKA3-203ENST00000400018 COMMD7Q86VX2 200 aa10□□□□□ -0.81
SKA3-203ENST00000400018 ST8SIA4Q92187 359 aa10□□□□□ -0.81
SKA3-203ENST00000400018 ABHD1Q96SE0 405 aa10□□□□□ -0.81
SKA3-203ENST00000400018 NXF2Q9GZY0 626 aaKnown RBP10□□□□□ -0.81
SKA3-203ENST00000400018 SLITRK2Q9H156 845 aa10□□□□□ -0.81
SKA3-203ENST00000400018 AUNIPQ9H7T9 357 aa10□□□□□ -0.81
SKA3-203ENST00000400018 IFT46Q9NQC8 304 aa10□□□□□ -0.81
SKA3-203ENST00000400018 SYNGR1O43759 233 aa10□□□□□ -0.81
SKA3-203ENST00000400018 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
SKA3-203ENST00000400018 CD40P25942 277 aa10□□□□□ -0.81
SKA3-203ENST00000400018 MAPK3P27361 379 aaPredicted RBP10□□□□□ -0.81
SKA3-203ENST00000400018 HTR2CP28335 458 aa10□□□□□ -0.81
SKA3-203ENST00000400018 SRP9P49458 86 aaKnown RBP10□□□□□ -0.81
SKA3-203ENST00000400018 RIPPLY1Q0D2K3 151 aa10□□□□□ -0.81
SKA3-203ENST00000400018 UNC119Q13432 240 aa10□□□□□ -0.81
SKA3-203ENST00000400018 MPPED2Q15777 294 aa10□□□□□ -0.81
SKA3-203ENST00000400018 NRN1LQ496H8 165 aa10□□□□□ -0.81
SKA3-203ENST00000400018 FAM201AQ5SY85 155 aa10□□□□□ -0.81
SKA3-203ENST00000400018 PRAMEF6Q5VXH4 476 aa10□□□□□ -0.81
SKA3-203ENST00000400018 WDR86Q86TI4 376 aa10□□□□□ -0.81
SKA3-203ENST00000400018 SLC25A28Q96A46 364 aa10□□□□□ -0.81
SKA3-203ENST00000400018 FAM3DQ96BQ1 224 aa10□□□□□ -0.81
SKA3-203ENST00000400018 PLPPR2Q96GM1 343 aa10□□□□□ -0.81
SKA3-203ENST00000400018 DCAF16Q9NXF7 216 aa10□□□□□ -0.81
SKA3-203ENST00000400018 JKAMPQ9P055 326 aa10□□□□□ -0.81
SKA3-203ENST00000400018 WIPF3A6NGB9 483 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 AIPO00170 330 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 CRHP06850 196 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 CD53P19397 219 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 CCL1P22362 96 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 COL8A1P27658 744 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 THBS4P35443 961 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 RPL35P42766 123 aaKnown RBP9.99□□□□□ -0.81
SKA3-203ENST00000400018 FAAP20Q6NZ36 180 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 TNFAIP8L1Q8WVP5 186 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 MARS2Q96GW9 593 aaKnown RBP9.99□□□□□ -0.81
SKA3-203ENST00000400018 MOB1AQ9H8S9 216 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 TMEM138Q9NPI0 162 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 PTPN13Q12923 2485 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 FABP12A6NFH5 140 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms