RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NPTNQ9Y639 398 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ZANQ9Y493 2812 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 HIVEP1P15822 2718 aa10.41□□□□□ -0.74
HLA-DQB1-203ENST00000399082 hCG_1807616A0A1W2PRN6 198 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 F8VVB4 439 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 F8VWA3 439 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 AKR7A2O43488 359 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 PLATP00750 562 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 PGA5P0DJD9 388 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 RAB3AP20336 220 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 PSMA1P25786 263 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 MAPK3P27361 379 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 IL2RGP31785 369 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 RBP2P50120 134 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ERVK11-1P61568 191 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 BTG1P62324 171 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 IL24Q13007 206 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 TRAM1Q15629 374 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 LHFPL2Q6ZUX7 228 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 ZNF573Q86YE8 665 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 POC1AQ8NBT0 407 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 OR10Z1Q8NGY1 313 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 CLDND2Q8NHS1 167 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 HPS1Q92902 700 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 YIPF6Q96EC8 236 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 GFI1Q99684 422 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 NRIP2Q9BQI9 281 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 REG4Q9BYZ8 158 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 PKIBQ9C010 78 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 WDR13Q9H1Z4 485 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 FOXJ3Q9UPW0 622 aa10.4□□□□□ -0.74
HLA-DQB1-203ENST00000399082 TRDV1A0A1B0GX56 115 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 H7C1Q1 480 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TNFRSF13BO14836 293 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FCN3O75636 299 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FSTL3O95633 263 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ALDOBP05062 364 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TFAP2AP05549 437 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 AMY2BP19961 511 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 BDKRB2P30411 391 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 POU3F4P49335 361 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ATP1B3P54709 279 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MTCP1P56278 107 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 LMO4P61968 165 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 KISS1Q15726 138 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ZNF404Q494X3 552 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TEX36Q5VZQ5 186 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SLC25A26Q70HW3 274 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 C1QL2Q7Z5L3 287 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 LRRC28Q86X40 367 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 BATF2Q8N1L9 274 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 BOLLQ8N9W6 283 aaKnown RBP10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR5D18Q8NGL1 313 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 THRSPQ92748 146 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TMIGD2Q96BF3 282 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 COX4I2Q96KJ9 171 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR51E2Q9H255 320 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 NARFLQ9H6Q4 476 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TMEM165Q9HC07 324 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 HES4Q9HCC6 221 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TMEM138Q9NPI0 162 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MTCH1Q9NZJ7 389 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ACANP16112 2415 aa10.39□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MED13LQ71F56 2210 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PPIAL4EA0A075B759 164 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 IGHV3OR15-7A0A075B7D8 119 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 LRRC30A6NM36 301 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PPIAL4DF5H284 164 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 LGALS8O00214 317 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SPRY1O43609 319 aaPredicted RBP10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ANGPTL7O43827 346 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TFF1P04155 84 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MAS1P04201 325 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 HCKP08631 526 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PPIAL4FP0DN26 164 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CD37P11049 281 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CD36P16671 472 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 USF1P22415 310 aaPredicted RBP10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 GADD45AP24522 165 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR3A4PP47883 348 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ALDH3B2P48448 385 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 LOXL1Q08397 574 aaPredicted RBP10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PDZK1IP1Q13113 114 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DDI2Q5TDH0 399 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SFRP4Q6FHJ7 346 aaPredicted RBP10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FAM90A1Q86YD7 464 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 C1orf87Q8N0U7 546 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR13F1Q8NGS4 319 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 RAB1CQ92928 201 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SLAMF9Q96A28 289 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TMEM246Q9BRR3 403 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TMUB1Q9BVT8 246 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MRPS26Q9BYN8 205 aaKnown RBP10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 RNF167Q9H6Y7 350 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PPIAL4AQ9Y536 164 aa10.38□□□□□ -0.75
HLA-DQB1-203ENST00000399082 A0A1B0GW55 424 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ISPDA4D126 451 aa10.37□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OOEPA6NGQ2 149 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms