RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 hCG_38984A0A1B0GV85 526 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 A0A1W2PNU3 283 aaPredicted RBP12.03□□□□□ -0.48
PRAME-202ENST00000398743 ZSCAN5BA6NJL1 495 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 IGHV3-9P01782 118 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 MMP7P09237 267 aaPredicted RBP12.03□□□□□ -0.48
PRAME-202ENST00000398743 CD59P13987 128 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 ZP3P21754 424 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 ECI1P42126 302 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 LHX2P50458 406 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 FAM3AP98173 230 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 FAM209AQ5JX71 171 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 TSPO2Q5TGU0 170 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 CDCP2Q5VXM1 449 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 NSUN5P2Q63ZY6 315 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 SIGIRRQ6IA17 410 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 RPUSD3Q6P087 351 aaKnown RBP12.03□□□□□ -0.48
PRAME-202ENST00000398743 CCDC120Q96HB5 630 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 LOXL4Q96JB6 756 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 ZNF471Q9BX82 626 aaPredicted RBP12.03□□□□□ -0.48
PRAME-202ENST00000398743 WDR13Q9H1Z4 485 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 HSF4Q9ULV5 492 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 EDARQ9UNE0 448 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 A0A1B0GW55 424 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 XRCC2O43543 280 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DUX4L2P0CJ85 424 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DUX4L3P0CJ86 424 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DUX4L4P0CJ87 422 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DUX4L5P0CJ88 424 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DUX4L6P0CJ89 424 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DUX4L7P0CJ90 424 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 M6PRP20645 277 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 GLRA1P23415 457 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 ITGA3P26006 1051 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 ZNF92Q03936 586 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 SRYQ05066 204 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 OR1C1Q15619 314 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 TAF9Q16594 264 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 ZSCAN4Q8NAM6 433 aaPredicted RBP12.03□□□□□ -0.48
PRAME-202ENST00000398743 DMRTA2Q96SC8 542 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DHRS9Q9BPW9 319 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 HES7Q9BYE0 225 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 DUX4Q9UBX2 424 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 CSAG2Q9Y5P2 127 aa12.03□□□□□ -0.48
PRAME-202ENST00000398743 IGKV1D-8A0A087WSZ0 117 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 TERTO14746 1132 aaKnown RBP12.02□□□□□ -0.48
PRAME-202ENST00000398743 RRP8O43159 456 aaKnown RBP12.02□□□□□ -0.48
PRAME-202ENST00000398743 CELA3AP09093 270 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 OR8B8Q15620 311 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 PABPC1L2AQ5JQF8 200 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 ASCL4Q6XD76 172 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 RELL2Q8NC24 303 aaPredicted RBP12.02□□□□□ -0.48
PRAME-202ENST00000398743 DCUN1D4Q92564 292 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 PHYHIPLQ96FC7 376 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 HDHD3Q9BSH5 251 aaPredicted RBP12.02□□□□□ -0.48
PRAME-202ENST00000398743 LINC00470Q9BZP3 86 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 RASL12Q9NYN1 266 aa12.02□□□□□ -0.48
PRAME-202ENST00000398743 C14orf166Q9Y224 244 aaKnown RBP12.02□□□□□ -0.48
PRAME-202ENST00000398743 ADAP1O75689 374 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 SCO1O75880 301 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 PGAM2P15259 253 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 FUT6P51993 359 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 CLDN18P56856 261 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 PXT1Q8NFP0 134 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 ZNF75AQ96N20 296 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 TECTBQ96PL2 329 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 ARPC5LQ9BPX5 153 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 ZNF2Q9BSG1 426 aaPredicted RBP12.02□□□□□ -0.49
PRAME-202ENST00000398743 FAAP24Q9BTP7 215 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 TTTY12Q9BZ98 90 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 PRDM14Q9GZV8 571 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 PARPBPQ9NWS1 579 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 ANXA10Q9UJ72 324 aa12.02□□□□□ -0.49
PRAME-202ENST00000398743 ZNF816-ZNF321PA0A0X1KG74 233 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 FAM166BA8MTA8 275 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 A8MXK9 166 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 F5H0A9 414 aaPredicted RBP12.01□□□□□ -0.49
PRAME-202ENST00000398743 CDX4O14627 284 aaPredicted RBP12.01□□□□□ -0.49
PRAME-202ENST00000398743 MT-CO3P00414 261 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 EDN3P14138 238 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 RPS2P15880 293 aaKnown RBP12.01□□□□□ -0.49
PRAME-202ENST00000398743 MAGEA5P43359 124 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 PLEKHN1Q494U1 663 aaPredicted RBP12.01□□□□□ -0.49
PRAME-202ENST00000398743 PLCXD3Q63HM9 321 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 LINC00696Q6ZRV3 163 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 HSD17B13Q7Z5P4 300 aaPredicted RBP12.01□□□□□ -0.49
PRAME-202ENST00000398743 ADAMTS17Q8TE56 1095 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 MRPS24Q96EL2 167 aaKnown RBP12.01□□□□□ -0.49
PRAME-202ENST00000398743 LINC00052Q96N35 136 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 METTL8Q9H825 291 aaKnown RBP12.01□□□□□ -0.49
PRAME-202ENST00000398743 SLC7A10Q9NS82 523 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 PRR13Q9NZ81 148 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 ATPIF1Q9UII2 106 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 AK3Q9UIJ7 227 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 TRBV6-7A0A0A0MS04 114 aa12.01□□□□□ -0.49
PRAME-202ENST00000398743 KRBOX1C9JBD0 128 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms