RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 DEFB108BQ8NET1 73 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 RAB24Q969Q5 203 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 WBP2Q969T9 261 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 LPAR3Q9UBY5 353 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ZFP30Q9Y2G7 519 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 PATJQ8NI35 1801 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 RBFOX3A6NFN3 312 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 CDRT15L2A8MXV6 281 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 C11orf94C9JXX5 98 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 HTN1P15515 57 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 UQCRFS1P47985 274 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 RIGQ13278 110 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 SLC25A26Q70HW3 274 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 ISL2Q96A47 359 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 TM4SF18Q96CE8 201 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 MS4A8Q9BY19 250 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 IL23AQ9NPF7 189 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 MGPP08493 103 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 OR10J1P30954 320 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 CLDN18P56856 261 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 LYZP61626 148 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 SLC48A1Q6P1K1 146 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 RNF165Q6ZSG1 346 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 ADPRHL1Q8NDY3 354 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 COPS9Q8WXC6 57 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 FAHD2AQ96GK7 314 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 PDLIM5Q96HC4 596 aaKnown RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 RAB40CQ96S21 281 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 HSD17B10Q99714 261 aaKnown RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 TMEM30CPA0ZSE6 113 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 DRGXA6NNA5 263 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 LRP10Q7Z4F1 713 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 OR2A5Q96R48 311 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 P01737 135 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 SLC37A1P57057 533 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 OR10A7Q8NGE5 316 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 MCHR2Q969V1 340 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 PIPOXQ9P0Z9 390 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 MIOXQ9UGB7 285 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 NAT8Q9UHE5 227 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 CRYBA1P05813 215 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 COMPP49747 757 aaPredicted RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 TCTAP57738 103 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 CD226Q15762 336 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 HLA-DRB5Q30154 266 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF841Q6ZN19 808 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 ZCCHC14Q8WYQ9 949 aaKnown RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 EID2BQ96D98 161 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 SOX21Q9Y651 276 aaPredicted RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 COL6A6A6NMZ7 2263 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 BCORP1Q8N888 145 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 MED19A0JLT2 244 aaPredicted RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 C1SP09871 688 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 HOXC13P31276 330 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 SLC16A11Q8NCK7 471 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 PXNP49023 591 aaPredicted RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 PPP1CAP62136 330 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 SPINK9Q5DT21 86 aa9.31□□□□□ -0.92
COL4A4-201ENST00000396625 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 ISG20L2Q9H9L3 353 aaKnown RBP9.31□□□□□ -0.92
COL4A4-201ENST00000396625 PAQR6Q6TCH4 344 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 MAVSQ7Z434 540 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 KMT5CQ86Y97 462 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 CALHM1Q8IU99 346 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 TXNRD2Q9NNW7 524 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 KCND3Q9UK17 655 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 OOEPA6NGQ2 149 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 HMGN4O00479 90 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 B4GALT1P15291 398 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 FPR2P25090 351 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 CEACAM6P40199 344 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 WNT3P56703 355 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 IER2Q9BTL4 223 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 PROCRQ9UNN8 238 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 PRSS37A4D1T9 235 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 SPRY1O43609 319 aaPredicted RBP9.3□□□□□ -0.92
COL4A4-201ENST00000396625 IGHA1P01876 353 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 IGHA2P01877 340 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 COX6CP09669 75 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 PGA3P0DJD8 388 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 DUSP2Q05923 314 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 NCMAPQ5T1S8 102 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 FNDC7Q5VTL7 733 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 SFTPA2Q8IWL1 248 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 SFTPA1Q8IWL2 248 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 LSMEM1Q8N8F7 131 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF519Q8TB69 540 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 GAGE10A6NGK3 116 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 AWAT1Q58HT5 328 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 SPATA46Q5T0L3 261 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 CST9Q5W186 159 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 INSM2Q96T92 566 aaPredicted RBP9.3□□□□□ -0.92
COL4A4-201ENST00000396625 ZPBPQ9BS86 351 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 CRYBG1Q9Y4K1 1723 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 A0A1B0GV72 72 aa9.3□□□□□ -0.92
COL4A4-201ENST00000396625 MBLAC1A4D2B0 266 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms