RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ZNF239Q16600 458 aaKnown RBP8.66□□□□□ -1.02
TRIM39-203ENST00000396547 DMRTC2Q8IXT2 367 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-203ENST00000396547 TMEM156Q8N614 296 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 OR5L1Q8NGL2 311 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 OR2AJ1Q8NGZ0 328 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF775Q96BV0 537 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-203ENST00000396547 GNRHR2Q96P88 292 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 FAM206AQ9NX38 181 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 GFOD1Q9NXC2 390 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 TGIF2-C20orf24A0A0A6YYL0 155 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 C5orf63A6NC05 138 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 IFITM10A6NMD0 228 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 PROB1E7EW31 1015 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 SRSF10O75494 262 aaKnown RBP8.66□□□□□ -1.02
TRIM39-203ENST00000396547 NDUFB7P17568 137 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 HNRNPA2B1P22626 353 aaKnown RBP8.66□□□□□ -1.02
TRIM39-203ENST00000396547 SLC6A8P48029 635 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 POLR2HP52434 150 aaKnown RBP8.66□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF121P58317 390 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-203ENST00000396547 SLC35A1P78382 337 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 MFAP5Q13361 173 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 NSDHLQ15738 373 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 ABCA11PQ4W5N1 156 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 DNM1P34Q6PK57 102 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 DEFB119Q8N690 84 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 CA5BP1Q8WTZ4 195 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 DYRK2Q92630 601 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 STARD10Q9Y365 291 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 CFAP54Q96N23 3096 aa8.66□□□□□ -1.02
TRIM39-203ENST00000396547 ASXL3Q9C0F0 2248 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 DHRS7CA6NNS2 312 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 F5H5K5 113 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 MS4A18H0YCH9 400 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 DEDDO75618 318 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 DXOO77932 396 aaKnown RBP8.65□□□□□ -1.02
TRIM39-203ENST00000396547 MBPP02686 304 aaPredicted RBP8.65□□□□□ -1.02
TRIM39-203ENST00000396547 CLPSP04118 112 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 ISG15P05161 165 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 GSTP1P09211 210 aaKnown RBP8.65□□□□□ -1.02
TRIM39-203ENST00000396547 CXCL1P09341 107 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 TDGF1P13385 188 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 GFERP55789 205 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 PIGPP57054 158 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 MS4A18Q3C1V0 323 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 LYPD6Q86Y78 171 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 EMG1Q92979 244 aaKnown RBP8.65□□□□□ -1.02
TRIM39-203ENST00000396547 PBDC1Q9BVG4 233 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 PLEKHJ1Q9NW61 149 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 TREM2Q9NZC2 230 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 GALR2O43603 387 aaPredicted RBP8.65□□□□□ -1.02
TRIM39-203ENST00000396547 MT-ATP6P00846 226 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 TRGC2P03986 189 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 HEXBP07686 556 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 HOXA5P20719 270 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 HSF1Q00613 529 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 VAX1Q5SQQ9 334 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 CYB5R2Q6BCY4 276 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 OR5AS1Q8N127 324 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 OR8B12Q8NGG6 310 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 MAGT1Q9H0U3 335 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 SMOC1Q9H4F8 434 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 ZDHHC8Q9ULC8 765 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 SRPK3Q9UPE1 567 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 TECTAO75443 2155 aa8.65□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF726A6NNF4 738 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 HPNP05981 417 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 OR5AC1P0C628 307 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 FCGR2AP12318 317 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 RPS2P15880 293 aaKnown RBP8.65□□□□□ -1.03
TRIM39-203ENST00000396547 MPZP25189 248 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 MMP16P51512 607 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 TLE1Q04724 770 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 PCK2Q16822 640 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 TMEM217Q8N7C4 229 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 OR10S1Q8NGN2 331 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 RNF133Q8WVZ7 376 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 TAAR9Q96RI9 348 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 CCNL2Q96S94 520 aaPredicted RBP8.65□□□□□ -1.03
TRIM39-203ENST00000396547 MESP1Q9BRJ9 268 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 CRLF2Q9HC73 371 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 PADI1Q9ULC6 663 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 OSGIN2Q9Y236 505 aa8.65□□□□□ -1.03
TRIM39-203ENST00000396547 H3BQ15 152 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 MASP2O00187 686 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 ANGPTL7O43827 346 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 ONECUT2O95948 504 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 DANCRP0C864 163 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 THBS4P35443 961 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 CDX1P47902 265 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-203ENST00000396547 AFF3P51826 1226 aaKnown RBP8.64□□□□□ -1.03
TRIM39-203ENST00000396547 NKX6-1P78426 367 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-203ENST00000396547 FAM3AP98173 230 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 RHEBQ15382 184 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 OR2T2Q6IF00 324 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 FBXW12Q6X9E4 464 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 OR52M1Q8NGK5 317 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 OR2G3Q8NGZ4 309 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 STT3BQ8TCJ2 826 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 RAB39BQ96DA2 213 aa8.64□□□□□ -1.03
TRIM39-203ENST00000396547 POM121Q96HA1 1249 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms