RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ZNF878C9JN71 531 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 STX10O60499 249 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 OR2B3O76000 313 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 VENTXO95231 258 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 SEMA4FO95754 770 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 P01737 135 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 IGKV5-2P06315 115 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 SLC35G6P0C7Q6 338 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 T-ENOLP0DO92 83 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 ICAM2P13598 275 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 GTF2F2P13984 249 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 SPRP35270 261 aaPredicted RBP3.9□□□□□ -1.78
GABPB1-204ENST00000396464 MYCNOSP40205 109 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 TTPAP49638 278 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 THBS3P49746 956 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 RPL32P62910 135 aaKnown RBP3.9□□□□□ -1.78
GABPB1-204ENST00000396464 SMAGPQ0VAQ4 97 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 ZNF235Q14590 738 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 CLEC12BQ2HXU8 276 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 CEACAM16Q2WEN9 425 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 CNPY1Q3B7I2 92 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 PAGE3Q5JUK9 113 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 HES5Q5TA89 166 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 C11orf71Q6IPW1 123 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 ZNF530Q6P9A1 599 aaPredicted RBP3.9□□□□□ -1.78
GABPB1-204ENST00000396464 SLC36A1Q7Z2H8 476 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 CHST4Q8NCG5 386 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 ASB17Q8WXJ9 295 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 MAFIPQ8WZ33 124 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 ATXN7L3BQ96GX2 97 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 OR51I1Q9H343 314 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 BOLA2Q9H3K6 86 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 SPHK2Q9NRA0 654 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 DNAJC27Q9NZQ0 273 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 SHPKQ9UHJ6 478 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 HHLA2Q9UM44 414 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 TRAPPC4Q9Y296 219 aa3.9□□□□□ -1.78
GABPB1-204ENST00000396464 DENND4AQ7Z401 1863 aa3.9□□□□□ -1.79
GABPB1-204ENST00000396464 ABCC10Q5T3U5 1492 aa3.9□□□□□ -1.79
GABPB1-204ENST00000396464 ABCC1P33527 1531 aa3.9□□□□□ -1.79
GABPB1-204ENST00000396464 GLI2P10070 1586 aa3.9□□□□□ -1.79
GABPB1-204ENST00000396464 DNMT1P26358 1616 aaKnown RBP3.9□□□□□ -1.79
GABPB1-204ENST00000396464 IGHV3OR16-13A0A075B7E8 117 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 SYCE1LA8MT33 242 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 PRAC2D3DTV9 90 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 PRSS44E7EML9 344 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 LINC01619G3V211 115 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 PHYHO14832 338 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 KMOO15229 486 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 HCRTR1O43613 425 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 CA11O75493 328 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 CNMDO75829 334 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 HAND1O96004 215 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 RENP00797 406 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 ZDHHC11BP0C7U3 371 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 OR5H8P0DN80 308 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 CD99P14209 185 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 IGHV1-2P23083 117 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 PAX6P26367 422 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 MARK3P27448 753 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 CRABP1P29762 137 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 PFN3P60673 137 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 FKBP3Q00688 224 aaKnown RBP3.89□□□□□ -1.79
GABPB1-204ENST00000396464 HIST3H3Q16695 136 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 MICAQ29983 383 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 C1orf195Q5TG92 126 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 KCTD16Q68DU8 428 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 C9orf47Q6ZRZ4 202 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 RASSF6Q6ZTQ3 369 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 DPPA2Q7Z7J5 298 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 RFLNBQ8N5W9 214 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 OR10G3Q8NGC4 313 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 OR1P1Q8NH06 330 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 OR52N1Q8NH53 320 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 MRGPRDQ8TDS7 321 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 SMIM12Q96EX1 92 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 RIOK2Q9BVS4 552 aaKnown RBP3.89□□□□□ -1.79
GABPB1-204ENST00000396464 RGS18Q9NS28 235 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 TREM2Q9NZC2 230 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.89□□□□□ -1.79
GABPB1-204ENST00000396464 CCDC141Q6ZP82 1450 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 HECW2Q9P2P5 1572 aa3.89□□□□□ -1.79
GABPB1-204ENST00000396464 GREB1LQ9C091 1923 aaPredicted RBP3.89□□□□□ -1.79
GABPB1-204ENST00000396464 A0A087WUJ7 227 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 C15orf65H3BRN8 121 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 J3QT63 122 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 PLIN3O60664 434 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 RDH16O75452 317 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 RP2O75695 350 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 IGLL1P15814 213 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 RCC1P18754 421 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 ELK4P28324 431 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 CDKN2AP42771 156 aaKnown RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 VDAC2P45880 294 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 RPS9P46781 194 aaKnown RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 GABRA4P48169 554 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 NDUFV3P56181 108 aaKnown RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 RAB25P57735 213 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 TAS2R41P59536 307 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 CACNG7P62955 275 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms